Factsheet for Zm00001d036092_P004

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87804	Sorghum	nucleus	89.86	94.8
Os06t0138000-01	Rice	cytosol, nucleus	26.85	79.03
TraesCS7D01G074500.1	Wheat	cytosol	67.95	70.66
TraesCS7A01G080900.1	Wheat	nucleus	67.67	70.37
TraesCS4A01G377900.2	Wheat	cytosol	67.12	69.8
HORVU5Hr1G097840.6	Barley	cytosol	65.48	68.29
HORVU7Hr1G018300.6	Barley	cytosol	65.48	67.9
TraesCS1B01G385900.1	Wheat	cytosol	62.74	66.96
TraesCS1A01G367300.1	Wheat	cytosol	62.47	65.33
TraesCS1D01G373000.1	Wheat	cytosol	62.47	63.51
Solyc09g015660.2.1	Tomato	cytosol	49.32	49.86
KRH04734	Soybean	nucleus	50.96	49.08
Solyc09g090370.2.1	Tomato	nucleus	45.21	47.69
GSMUA_Achr8P29340_001	Banana	nucleus	49.59	46.29
PGSC0003DMT400044321	Potato	nucleus	47.4	45.89
VIT_13s0019g03950.t01	Wine grape	nucleus	48.49	45.85
Bra012810.1-P	Field mustard	cytosol	41.92	42.98
KRH45305	Soybean	nucleus	42.47	42.23
CDX90608	Canola	cytosol	41.1	42.13
KRH37141	Soybean	cytosol, nucleus	31.23	41.76
CDY29075	Canola	cytoskeleton, cytosol, nucleus	41.37	41.48
AT2G34900.1	Thale cress	nucleus	42.19	39.9
KRH12139	Soybean	nucleus	37.53	39.26
AT3G52280.2	Thale cress	nucleus	41.37	39.12
Bra005383.1-P	Field mustard	nucleus	40.82	38.7
CDY31648	Canola	nucleus	40.82	35.06
GSMUA_Achr8P34430_001	Banana	nucleus	40.27	34.19
CDX84278	Canola	nucleus	40.82	34.02
Bra034451.1-P	Field mustard	cytosol	36.71	25.38
Zm00001d008922_P001	Maize	plastid	21.37	15.92
Zm00001d024251_P001	Maize	cytosol	20.82	15.61
Zm00001d049400_P001	Maize	plastid	20.27	15.29
Zm00001d002267_P001	Maize	plastid	18.63	15.08
Zm00001d026333_P001	Maize	cytosol	19.18	14.86
Zm00001d046528_P001	Maize	cytosol	5.75	14.0
Zm00001d016131_P006	Maize	nucleus	22.47	12.22
Zm00001d053427_P007	Maize	nucleus	22.47	12.01
Zm00001d017126_P001	Maize	nucleus	21.92	11.49
Zm00001d035167_P001	Maize	nucleus	23.01	11.08
Zm00001d049638_P009	Maize	nucleus	23.29	10.94
Zm00001d004790_P008	Maize	nucleus	16.16	10.21
Zm00001d053022_P001	Maize	nucleus	15.07	8.97
Zm00001d039369_P004	Maize	plastid	21.37	8.32
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.27	1.28

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	EntrezGene:100191869	MapMan:15.5.54	UniProt:A0A1D6LKQ1	ProteinID:AQK80280.1
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573
GO:GO:0019538	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom
InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525
PANTHER:PTHR22880	PANTHER:PTHR22880:SF180	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0008424119	EnsemblPlantsGene:Zm00001d036092
EnsemblPlants:Zm00001d036092_P004	EnsemblPlants:Zm00001d036092_T004	SEG:seg	:	:	:

Description

Transcription factor GTE1

Coordinates

chr6:+:71924402..71928562

Molecular Weight (calculated)

41410.6 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.620

Length

365 amino acids

Sequence
(BLAST)

001: MTPANGAPAR AAEAGPHEVE SEADAFRRQV DDLVSKTDVL ERRVKEVADF YDGKKHGSGG RKGGGGGRYG ASSRGMPDLM RQFGVLLKEV TLSVLAWFVL
101: FCWVAKHAIT SHKDAWPFLE PVDVVTLQLP DYHNIITQPM DFSTIQKKME RKDGTCYTNV REICSDVRLI FANAMKYNDD QNVIHLMAKS LLEKFEEKWL
201: HFLPKVESEE KRQKEEESKG VAATNTSREV AIVKLAKDTD DELNQINKKL EELRKMVVHR CRKMTTDEKR KLGAGICHLS PDDLSKALEI VAQDNPSFQT
301: KAEEVDLDMD AQSETTLWRL KFFVREALER QANVASGKMD ENAKRKREIC NALAKTTSRR IKKQP

Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)

001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA

Arabidopsis Description

GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.