Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37141 | Soybean | cytosol, nucleus | 68.19 | 87.18 |
| KRH45305 | Soybean | nucleus | 54.73 | 52.04 |
| Solyc09g090370.2.1 | Tomato | nucleus | 46.7 | 47.11 |
| KRH04734 | Soybean | nucleus | 50.72 | 46.7 |
| PGSC0003DMT400044321 | Potato | nucleus | 48.42 | 44.83 |
| TraesCS7A01G080900.1 | Wheat | nucleus | 41.83 | 41.6 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 41.55 | 41.31 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 41.55 | 41.31 |
| TraesCS1B01G385900.1 | Wheat | cytosol | 39.83 | 40.64 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 40.69 | 40.57 |
| TraesCS1A01G367300.1 | Wheat | cytosol | 40.4 | 40.4 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 40.4 | 40.06 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 44.7 | 39.9 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 40.97 | 39.83 |
| EER87804 | Sorghum | nucleus | 38.97 | 39.31 |
| Bra005383.1-P | Field mustard | nucleus | 42.69 | 38.7 |
| AT2G34900.1 | Thale cress | nucleus | 42.41 | 38.34 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 39.26 | 37.53 |
| CDY31648 | Canola | nucleus | 42.69 | 35.06 |
| CDX84278 | Canola | nucleus | 42.69 | 34.02 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 38.97 | 31.63 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 11.17 | 31.45 |
| Bra034451.1-P | Field mustard | cytosol | 38.4 | 25.38 |
| KRH27020 | Soybean | nucleus | 24.93 | 13.47 |
| KRH21702 | Soybean | nucleus | 20.34 | 13.37 |
| KRH22304 | Soybean | nucleus | 24.36 | 13.28 |
| KRH10646 | Soybean | nucleus | 20.06 | 13.23 |
| KRH10648 | Soybean | nucleus | 19.77 | 12.87 |
| KRH21136 | Soybean | nucleus | 16.05 | 9.89 |
| KRH25703 | Soybean | nucleus | 24.64 | 9.84 |
| KRH07021 | Soybean | nucleus | 20.92 | 9.81 |
| KRH11112 | Soybean | nucleus | 15.47 | 9.56 |
| KRH54219 | Soybean | nucleus | 20.92 | 9.26 |
| KRH63729 | Soybean | nucleus | 20.63 | 9.2 |
| KRH57199 | Soybean | nucleus | 19.2 | 9.07 |
| KRG94435 | Soybean | nucleus | 19.2 | 9.03 |
| KRH07022 | Soybean | nucleus | 20.06 | 8.91 |
| KRH55813 | Soybean | nucleus | 24.36 | 8.63 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:100795037 | MapMan:15.5.54 | UniProt:A0A0R0GAG4 | EMBL:ACUP02009269 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | EnsemblPlantsGene:GLYMA_15G154600 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GTE1/GTE6 |
| InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | EnsemblPlants:KRH12139 | ProteinID:KRH12139 |
| ProteinID:KRH12139.1 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 |
| PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 | SMART:SM00297 | SUPFAM:SSF47370 |
| UniParc:UPI000233B323 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:12869013..12877308
Molecular Weight (calculated)
40534.3 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.807
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPTLDVSTP SPNVIEEDLN SFWQSIYENS NKVQKLEEQV AEVQKFYSTI NDQVNDAKDK GREKHVIGTK RSQQGGSSRE ANSSNTMKEV MHQFSIIFHQ
101: ITHQRWAWPF MEPVDVEGLG LHDYYQIIEK PMDFGTIKRK MNAKDGSGYK NVREIYSDVR LVFENAMKYN GEKNDVHIMA KTLLEKFEKK WLQLLPKVAQ
201: AEREKEEARV LLEAKRAQEA TYAKMTKDIR HALCDVDEQL KNLKEMVIKK CRKLSTHEKL ALKKNLSRLN GGNLLKAMSI IHEIDPTFQH DAPQVDLDLD
301: RQSDFILWKL NLFTKEALED QDKAAAEEMA VNHNVNTEDQ KNTNKRRKL
101: ITHQRWAWPF MEPVDVEGLG LHDYYQIIEK PMDFGTIKRK MNAKDGSGYK NVREIYSDVR LVFENAMKYN GEKNDVHIMA KTLLEKFEKK WLQLLPKVAQ
201: AEREKEEARV LLEAKRAQEA TYAKMTKDIR HALCDVDEQL KNLKEMVIKK CRKLSTHEKL ALKKNLSRLN GGNLLKAMSI IHEIDPTFQH DAPQVDLDLD
301: RQSDFILWKL NLFTKEALED QDKAAAEEMA VNHNVNTEDQ KNTNKRRKL
001: MADSVPGHVA GGGLQGFSVD AECIKQRVDE VLQWVDSLEH KLKEVEEFYS SIGVSNSGSI GKDTEKGRHV VGIRKIQQEA ARREAVAAKR MQDLMRQFGT
101: IFRQITQHKC AWPFMHPVNV EGLGLHDYFE VIDKPMDFST IKNQMEAKDG TGYKHVMQIY ADMRLVFENA MNYNEETSDV YSMAKKLLEK FEEKWAHFLP
201: KVQEEEKIRE EEEKQAAKEA LLAKEASHIK TTRELGNEIC HANDELEKLM RKVVERCRKI TIEEKRNIGL ALLKLSPDDL QKVLGIVAQA NPSFQPRAEE
301: VSIEMDILDE PTLWRLKFFV KDALDNAMKK KKEEETKTRE LSGAQKKEVS KKRNATTKLA ERKTKRSRI
101: IFRQITQHKC AWPFMHPVNV EGLGLHDYFE VIDKPMDFST IKNQMEAKDG TGYKHVMQIY ADMRLVFENA MNYNEETSDV YSMAKKLLEK FEEKWAHFLP
201: KVQEEEKIRE EEEKQAAKEA LLAKEASHIK TTRELGNEIC HANDELEKLM RKVVERCRKI TIEEKRNIGL ALLKLSPDDL QKVLGIVAQA NPSFQPRAEE
301: VSIEMDILDE PTLWRLKFFV KDALDNAMKK KKEEETKTRE LSGAQKKEVS KKRNATTKLA ERKTKRSRI
Arabidopsis Description
GTE6General transcription factor group E6 [Source:UniProtKB/TrEMBL;Acc:F4J6V6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.