Factsheet for TraesCS1D01G373000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G385900.1	Wheat	cytosol	91.64	96.2
TraesCS1A01G367300.1	Wheat	cytosol	92.2	94.84
TraesCS7D01G074500.1	Wheat	cytosol	75.21	76.92
Os06t0138000-01	Rice	cytosol, nucleus	25.91	75.0
EER87804	Sorghum	nucleus	64.07	66.47
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	63.51	62.47
KRH04734	Soybean	nucleus	51.53	48.81
Solyc09g015660.2.1	Tomato	cytosol	47.91	47.65
Solyc09g090370.2.1	Tomato	nucleus	45.68	47.4
VIT_13s0019g03950.t01	Wine grape	nucleus	49.58	46.11
GSMUA_Achr8P29340_001	Banana	nucleus	50.14	46.04
PGSC0003DMT400044321	Potato	nucleus	48.19	45.89
KRH45305	Soybean	nucleus	44.57	43.6
KRH37141	Soybean	cytosol, nucleus	32.59	42.86
Bra012810.1-P	Field mustard	cytosol	42.34	42.7
CDY29075	Canola	cytoskeleton, cytosol, nucleus	42.9	42.31
CDX90608	Canola	cytosol	41.78	42.13
KRH12139	Soybean	nucleus	39.83	40.97
AT2G34900.1	Thale cress	nucleus	43.73	40.67
Bra005383.1-P	Field mustard	nucleus	42.9	40.0
AT3G52280.2	Thale cress	nucleus	42.34	39.38
CDY31648	Canola	nucleus	43.73	36.94
CDX84278	Canola	nucleus	43.73	35.84
GSMUA_Achr8P34430_001	Banana	nucleus	39.0	32.56
Bra034451.1-P	Field mustard	cytosol	39.55	26.89
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	13.65	22.69
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	13.65	22.07
TraesCS3D01G146600.1	Wheat	nucleus, plastid	22.56	16.01
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	19.78	15.11
TraesCS6D01G177700.1	Wheat	cytosol, plastid	23.4	13.23
TraesCS7D01G526000.1	Wheat	nucleus, plastid	15.32	10.19
TraesCS3D01G087900.4	Wheat	nucleus	20.06	10.06
TraesCS6D01G196600.3	Wheat	nucleus	19.22	9.82
TraesCS3D01G124100.1	Wheat	nucleus	18.94	9.54
TraesCS7D01G309100.1	Wheat	nucleus	18.66	8.93

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:GTE1/GTE6	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336
InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF163	SMART:SM00297	SUPFAM:SSF47370	EnsemblPlantsGene:TraesCS1D01G373000
EnsemblPlants:TraesCS1D01G373000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:451129038..451132216

Molecular Weight (calculated)

40702.2 Da

IEP (calculated)

5.753

GRAVY (calculated)

-0.694

Length

359 amino acids

Sequence
(BLAST)

001: MSVVRGAAME GAWPHPAPME PTTAADGPQV SEVNSFRRQV DDLLSKTDVL EKRVNEVVGF YNSKKHSSGG RKAGGRYAEN GARDSHGNGM PDLMRQFAGI
101: IRQITSHEWA QPFLQPVDVV GLQLDDYHQI ITKPMDFSTI RNKMEGKEST TYNSVREIYS DVRLVFTNAM KYNVEGHPVN IMAKFLLERF EEKWLHLLPK
201: VENEEREREE PNDAPTISIS PEAAIAKLAE DTGNELNEIN KQLEELQKMV VQRCRKMTTD EKRKLGAGLC QLSPEDLNKA LELVAQDNPS FQTTAEEVDL
301: DMDAQSETTL WRLKFFVREA LEQQANVDIK ACGKTDENTK RSRDMYNALA KTVSKRVKR

Best Arabidopsis Sequence Match ( AT3G52280.1 )
(BLAST)

001: MADSVPGHVA GGGLQGFSVD AECIKQRVDE VLQWVDSLEH KLKEVEEFYS SIGVSNSGSI GKDTEKGRHV VGIRKIQQEA ARREAVAAKR MQDLMRQFGT
101: IFRQITQHKC AWPFMHPVNV EGLGLHDYFE VIDKPMDFST IKNQMEAKDG TGYKHVMQIY ADMRLVFENA MNYNEETSDV YSMAKKLLEK FEEKWAHFLP
201: KVQEEEKIRE EEEKQAAKEA LLAKEASHIK TTRELGNEIC HANDELEKLM RKVVERCRKI TIEEKRNIGL ALLKLSPDDL QKVLGIVAQA NPSFQPRAEE
301: VSIEMDILDE PTLWRLKFFV KDALDNAMKK KKEEETKTRE LSGAQKKEVS KKRNATTKLA ERKTKRSRI

Arabidopsis Description

GTE6General transcription factor group E6 [Source:UniProtKB/TrEMBL;Acc:F4J6V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.