Factsheet for TraesCS3D01G234900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G234500.1	Wheat	cytosol	89.64	90.45
TraesCS3A01G234000.1	Wheat	cytosol	88.29	89.09
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	88.29	89.09
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	78.83	81.02
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	50.9	47.48
KXG33001	Sorghum	plastid	43.24	42.29
TraesCS3D01G146600.1	Wheat	nucleus, plastid	34.68	15.22
TraesCS7D01G074500.1	Wheat	cytosol	22.07	13.96
TraesCS1D01G373000.1	Wheat	cytosol	22.07	13.65
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	27.48	12.98
TraesCS6D01G177700.1	Wheat	cytosol, plastid	36.49	12.76
TraesCS7D01G526000.1	Wheat	nucleus, plastid	22.97	9.44
TraesCS6D01G196600.3	Wheat	nucleus	25.68	8.11
TraesCS3D01G124100.1	Wheat	nucleus	25.68	7.99
TraesCS7D01G309100.1	Wheat	nucleus	26.58	7.87
TraesCS3D01G087900.4	Wheat	nucleus	24.32	7.54

Protein Annotations

EnsemblPlants:TraesCS3D01G234900.1	EnsemblPlantsGene:TraesCS3D01G234900	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147
PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	SEG:seg	SMART:SM00297	SUPFAM:SSF47370
MapMan:15.5.54	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:324392898..324393566

Molecular Weight (calculated)

25155.1 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.379

Length

222 amino acids

Sequence
(BLAST)

001: MASQSIPTGA PPGFPKPTNY LPAADLPRAL ERCRVLLDEL LQHEDGWVFA KPVDTYEPGL GDYHSEIRQP MDLGTVRRRL ERRRYQNPLC FASDVRRTFR
101: NAMTYNYKGD DVYKSADVLS RIFESGWASI SATLQSPPPV AERRARLKDE LPRLPVDLQE KAAVIMKDVG GWIQEVDGRV EVDLDKADEA TLDKLEWLLA
201: LATMRKVIIL SIWSPCDSIW AA

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.