Factsheet for TraesCS3A01G234500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G234000.1	Wheat	cytosol	95.0	95.0
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	92.27	92.27
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	90.45	89.64
TraesCS3A01G234600.1	Wheat	cytosol, nucleus, plastid	82.27	84.19
TraesCS3A01G234100.1	Wheat	cytosol, nucleus, plastid	82.27	84.19
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	51.82	47.9
KXG33001	Sorghum	plastid	44.09	42.73
TraesCS3A01G140500.1	Wheat	nucleus, plastid	34.55	14.9
TraesCS1A01G367300.1	Wheat	cytosol	21.82	13.75
TraesCS4A01G377900.2	Wheat	cytosol	21.82	13.68
TraesCS7A01G080900.1	Wheat	nucleus	21.82	13.68
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	27.73	13.06
TraesCS7A01G539800.2	Wheat	nucleus, plastid	22.27	8.93
TraesCS3A01G087800.1	Wheat	plastid	23.64	8.52
TraesCS3A01G122200.1	Wheat	nucleus	26.36	8.13
TraesCS6A01G214000.1	Wheat	nucleus	25.45	7.93
TraesCS7A01G312700.2	Wheat	nucleus	25.45	7.47

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674	GO:GO:0005044
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	InterPro:IPR001190	InterPro:IPR001487
InterPro:IPR036427	PFAM:PF00439	PRINTS:PR00503	PFscan:PS50014	PFscan:PS50287	PANTHER:PTHR22880
PANTHER:PTHR22880:SF147	SMART:SM00297	InterPro:SRCR	SUPFAM:SSF47370	EnsemblPlantsGene:TraesCS3A01G234500	EnsemblPlants:TraesCS3A01G234500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:437867165..437870824

Molecular Weight (calculated)

24780.5 Da

IEP (calculated)

5.897

GRAVY (calculated)

-0.470

Length

220 amino acids

Sequence
(BLAST)

001: MASQSSPDGA PPGFPKPANY LAAADLPRAL ERCRVLLDEL LQHEDGWVFA KPVDTYELGL RNYHSEIRQP MDLGTVRRRL ERRRYQNPLC FASDVRRTFR
101: NAMTYNYKGD DVYKSADVLS RIFESGWASI SATLQSPPPV VERRARLKDE LPRLPVDLQY KAAVIMKDVG GWIQEVDGRV EVDLDKADEA TLDKLEWLLA
201: LATMRKDAGV LDNQTGCGAA

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.