Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005383.1-P | Field mustard | nucleus | 83.68 | 83.9 |
| CDY31648 | Canola | nucleus | 83.68 | 76.0 |
| CDX84278 | Canola | nucleus | 82.9 | 73.06 |
| Solyc09g090370.2.1 | Tomato | nucleus | 47.41 | 52.89 |
| Bra034451.1-P | Field mustard | cytosol | 71.5 | 52.27 |
| PGSC0003DMT400044321 | Potato | nucleus | 50.26 | 51.46 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 16.32 | 50.81 |
| KRH45305 | Soybean | nucleus | 46.89 | 49.32 |
| KRH37141 | Soybean | cytosol, nucleus | 32.9 | 46.52 |
| TraesCS1B01G385900.1 | Wheat | cytosol | 40.41 | 45.61 |
| EER87804 | Sorghum | nucleus | 40.41 | 45.09 |
| TraesCS1A01G367300.1 | Wheat | cytosol | 40.41 | 44.7 |
| TraesCS7A01G080900.1 | Wheat | nucleus | 40.16 | 44.16 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 39.9 | 43.87 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 39.9 | 43.75 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 44.3 | 43.73 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 40.67 | 43.73 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 39.64 | 43.59 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 39.38 | 43.43 |
| KRH12139 | Soybean | nucleus | 38.34 | 42.41 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 39.9 | 42.19 |
| AT3G52280.2 | Thale cress | nucleus | 40.16 | 40.16 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 39.38 | 35.35 |
| AT1G73150.1 | Thale cress | plastid | 22.54 | 18.87 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 22.54 | 17.86 |
| AT5G10550.1 | Thale cress | nucleus | 21.24 | 14.11 |
| AT5G46550.1 | Thale cress | cytosol | 16.06 | 12.55 |
| AT5G65630.1 | Thale cress | nucleus | 19.17 | 12.54 |
| AT5G14270.2 | Thale cress | nucleus | 22.28 | 12.48 |
| AT3G01770.1 | Thale cress | nucleus | 19.69 | 12.26 |
| AT1G06230.2 | Thale cress | nucleus | 23.06 | 11.62 |
| AT3G27260.3 | Thale cress | nucleus | 21.24 | 9.98 |
| AT5G63320.1 | Thale cress | nucleus | 19.95 | 7.26 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | EntrezGene:818055 | ProteinID:AAC12830.1 | ProteinID:AEC09037.1 |
| EMBL:AK222242 | EMBL:AK230434 | ArrayExpress:AT2G34900 | EnsemblPlantsGene:AT2G34900 | RefSeq:AT2G34900 | TAIR:AT2G34900 |
| RefSeq:AT2G34900-TAIR-G | EnsemblPlants:AT2G34900.1 | TAIR:AT2G34900.1 | EMBL:AY180100 | Unigene:At.37743 | EMBL:BT026469 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010030 | GO:GO:0045893 | Symbol:GTE01 | InterPro:GTE1/GTE6 |
| InterPro:GTE_bromo | Symbol:IMB1 | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | RefSeq:NP_181036.2 | PFAM:PF00439 | PFAM:PF17035 | PIRSF:PIRSF038154 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 |
| UniProt:Q84XV2 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0000005BB8 | SEG:seg | : |
Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
Coordinates
chr2:-:14723013..14725684
Molecular Weight (calculated)
43444.5 Da
IEP (calculated)
6.300
GRAVY (calculated)
-0.720
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.