CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	94.8	89.86
Os06t0138000-01	Rice	cytosol, nucleus	28.61	79.84
TraesCS7D01G074500.1	Wheat	cytosol	71.1	70.09
TraesCS7A01G080900.1	Wheat	nucleus	70.81	69.8
HORVU5Hr1G097840.6	Barley	cytosol	70.23	69.43
TraesCS4A01G377900.2	Wheat	cytosol	70.23	69.23
HORVU7Hr1G018300.6	Barley	cytosol	68.5	67.33
TraesCS1B01G385900.1	Wheat	cytosol	66.47	67.25
TraesCS1A01G367300.1	Wheat	cytosol	66.47	65.9
TraesCS1D01G373000.1	Wheat	cytosol	66.47	64.07
Solyc09g015660.2.1	Tomato	cytosol	52.6	50.42
KRH04734	Soybean	nucleus	53.76	49.08
Solyc09g090370.2.1	Tomato	nucleus	48.27	48.27
GSMUA_Achr8P29340_001	Banana	nucleus	53.18	47.06
PGSC0003DMT400044321	Potato	nucleus	50.58	46.42
VIT_13s0019g03950.t01	Wine grape	nucleus	51.45	46.11
Bra012810.1-P	Field mustard	cytosol	44.22	42.98
KRH45305	Soybean	nucleus	45.09	42.51
CDX90608	Canola	cytosol	43.35	42.13
CDY29075	Canola	cytoskeleton, cytosol, nucleus	43.64	41.48
KRH37141	Soybean	cytosol, nucleus	32.37	41.03
AT2G34900.1	Thale cress	nucleus	45.09	40.41
Bra005383.1-P	Field mustard	nucleus	43.64	39.22
AT3G52280.2	Thale cress	nucleus	43.64	39.12
KRH12139	Soybean	nucleus	39.31	38.97
CDY31648	Canola	nucleus	43.64	35.53
CDX84278	Canola	nucleus	43.64	34.47
GSMUA_Achr8P34430_001	Banana	nucleus	42.2	33.95
Bra034451.1-P	Field mustard	cytosol	39.02	25.57
KXG33001	Sorghum	plastid	13.01	19.82
EES02258	Sorghum	plastid	22.54	17.49
OQU82367	Sorghum	nucleus	13.58	15.56
KXG24660	Sorghum	plastid	21.68	15.24
EER97261	Sorghum	nucleus	17.05	12.12
KXG24325	Sorghum	nucleus	24.57	12.01
EES07108	Sorghum	nucleus	23.7	11.53
OQU84709	Sorghum	nucleus	23.7	11.52
EES09391	Sorghum	cytosol, mitochondrion, nucleus	14.16	11.26
EES09393	Sorghum	nucleus	16.47	9.42

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:8068418	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
UniProt:C5Z3Q9	ncoils:Coil	EnsemblPlants:EER87804	ProteinID:EER87804	ProteinID:EER87804.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0019538	InterPro:IPR001487	InterPro:IPR027353
InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035
PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF180	SMART:SM00297
EnsemblPlantsGene:SORBI_3010G028300	SUPFAM:SSF47370	unigene:Sbi.15442	UniParc:UPI0001A88F08	RefSeq:XP_002436437.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:2308662..2313451

Molecular Weight (calculated)

39223.9 Da

IEP (calculated)

8.687

GRAVY (calculated)

-0.732

Length

346 amino acids

Sequence
(BLAST)

001: MTPANGAPAP AAESVPPEVE SEADAFRRQV DDLVSKTDVL EKRVKEVVDF YDGKKHGSGG RKGGGGGRHG AYSRGMPDLM RQFGVLLKEI TSHKDAWPFL
101: KPVDVVTLHI PDYHKIITQP MDFSTIQKKM ERKDGTCYTN VREICSDVRL IFANAMKYND DQNVVHLMAK SLLEKFEEKW LHFLPKVESE EKRQKEEESK
201: GVAATNTSRE VAIAKLAKDT DDELNQINRK LEELRKMVVH RCRKMTTDEK RKLGAGICHL SPDDLNKALE IVAQDNPSFQ TKAEEVDLDM DAQSETTLWR
301: LKFFVREALE RQANVASGKM DENAKRKREI CNALAKTASK RIKKQP

Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)

001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA

Arabidopsis Description

GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.