Factsheet for Zm00001d024251_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24660	Sorghum	plastid	88.5	87.6
Zm00001d049400_P001	Maize	plastid	85.22	85.74
Os08t0192800-01	Rice	nucleus	67.97	68.81
Zm00001d002267_P001	Maize	plastid	48.05	51.88
Zm00001d026333_P001	Maize	cytosol	46.82	48.41
Zm00001d046528_P001	Maize	cytosol	14.78	48.0
CDY08771	Canola	nucleus	24.64	33.9
GSMUA_Achr1P15650_001	Banana	nucleus	33.47	33.13
GSMUA_Achr3P00480_001	Banana	nucleus	34.91	32.57
CDX78390	Canola	nucleus	15.81	32.22
CDX70356	Canola	nucleus, plastid	16.22	31.98
KRH10648	Soybean	nucleus	33.68	30.6
KRH21702	Soybean	nucleus	33.26	30.51
VIT_03s0097g00570.t01	Wine grape	nucleus	34.5	30.43
KRH10646	Soybean	nucleus	32.65	30.06
Zm00001d008922_P001	Maize	plastid	30.18	30.0
CDY65645	Canola	nucleus, plastid	30.8	29.47
CDY65656	Canola	cytosol	12.32	28.99
Bra024402.1-P	Field mustard	nucleus, plastid	31.62	28.26
Bra005311.1-P	Field mustard	cytosol, plastid	13.14	27.47
AT5G10550.1	Thale cress	nucleus	32.44	27.19
Bra006068.1-P	Field mustard	nucleus	30.6	27.14
PGSC0003DMT400008041	Potato	nucleus	33.26	26.91
Solyc01g106280.2.1	Tomato	nucleus	33.26	26.91
AT5G65630.1	Thale cress	nucleus	32.24	26.61
PGSC0003DMT400078795	Potato	nucleus	29.36	24.16
Solyc02g091660.2.1	Tomato	nucleus	26.49	24.11
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	15.61	20.82
CDX70357	Canola	plastid	16.63	20.61
Zm00001d016131_P006	Maize	nucleus	27.93	20.27
Zm00001d053427_P007	Maize	nucleus	24.23	17.28
Zm00001d017126_P001	Maize	nucleus	23.0	16.09
Zm00001d039369_P004	Maize	plastid	29.77	15.47
Zm00001d035167_P001	Maize	nucleus	21.15	13.59
Zm00001d049638_P009	Maize	nucleus	20.53	12.87
Zm00001d004790_P008	Maize	nucleus	14.37	12.11
Zm00001d053022_P001	Maize	nucleus	14.58	11.58
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	EntrezGene:103641126	MapMan:15.5.54	ProteinID:AQK40905.1	InterPro:Bromodomain
InterPro:Bromodomain-like_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487	InterPro:IPR027353
InterPro:IPR036427	InterPro:IPR038336	UniProt:K7TPV5	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439
PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF162
SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002217D16	EnsemblPlantsGene:Zm00001d024251	EnsemblPlants:Zm00001d024251_P001	EnsemblPlants:Zm00001d024251_T001
SEG:seg	:	:	:	:	:

Description

Transcription factor GTE7

Coordinates

chr10:+:59639653..59641801

Molecular Weight (calculated)

54437.0 Da

IEP (calculated)

6.177

GRAVY (calculated)

-0.781

Length

487 amino acids

Sequence
(BLAST)

001: MTSAVLAGRD EVHHGHPHHR HWGGARAPLM PKPSSNPNPR RYRPGPNPIV SGSPPAPRAG SAVAAEPLPS PLRHVKFRPS ELTPAEARHL RERLTGELGR
101: VRAFVSRIDS WQDGRRRGPE PEPEPPARRS SPPPALVEAM RRRCADILTR LRRSKKSVWF NSPVDVEGLK LHDYRAIIRS PMDLGTVKQN LTAGRYPSHE
201: AFAGDVRLTF NNALRYNPPD HHVHRYAGDL LATFEGMYKE AVSWFEQQRQ QLEPPMQLDL LPPPPPPQLP VSVPVQAPLR MWGGRRPKPK ARQPNKREMD
301: EEEKQKLRVE IENLPEDKVL NVLQIVQKRN RDPALSGEVV ELDFDELDIE TLWELDRFVV NWRKALKKSQ RNSRMNGDAA VMNADAIDAT IVPDDDDRVE
401: VAVNPSVVVE IGESETDVPE KNEVEAEMGD EYVDIGDEML TMNYQSVEIQ RDSLAASSSS GPGSGSSSST DSDLDPESDG DNASAPH

Best Arabidopsis Sequence Match ( AT1G06230.1 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.