Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70356 | Canola | nucleus, plastid | 98.74 | 95.55 |
| CDY08771 | Canola | nucleus | 68.62 | 46.33 |
| Bra006068.1-P | Field mustard | nucleus | 99.16 | 43.17 |
| CDY65656 | Canola | cytosol | 34.31 | 39.61 |
| CDY66497 | Canola | nucleus | 23.43 | 36.13 |
| CDY65645 | Canola | nucleus, plastid | 74.9 | 35.17 |
| AT5G10550.1 | Thale cress | nucleus | 85.36 | 35.11 |
| Zm00001d046528_P001 | Maize | cytosol | 20.92 | 33.33 |
| CDY26219 | Canola | nucleus | 23.85 | 30.65 |
| OQU82367 | Sorghum | nucleus | 33.05 | 26.16 |
| CDY15568 | Canola | nucleus | 31.8 | 23.97 |
| KRH10648 | Soybean | nucleus | 48.54 | 21.64 |
| VIT_03s0097g00570.t01 | Wine grape | nucleus | 49.79 | 21.56 |
| KRH10646 | Soybean | nucleus | 47.7 | 21.55 |
| KRH21702 | Soybean | nucleus | 47.7 | 21.47 |
| GSMUA_Achr3P00480_001 | Banana | nucleus | 42.26 | 19.35 |
| GSMUA_Achr1P15650_001 | Banana | nucleus | 39.75 | 19.31 |
| Os04t0622800-00 | Rice | cytosol | 24.69 | 18.97 |
| Solyc02g091660.2.1 | Tomato | nucleus | 41.84 | 18.69 |
| PGSC0003DMT400078795 | Potato | nucleus | 44.77 | 18.07 |
| Os08t0192800-01 | Rice | nucleus | 35.56 | 17.67 |
| Zm00001d002267_P001 | Maize | plastid | 33.05 | 17.52 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 20.08 | 17.45 |
| Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 33.05 | 17.32 |
| Zm00001d049400_P001 | Maize | plastid | 34.31 | 16.94 |
| KXG24660 | Sorghum | plastid | 34.73 | 16.87 |
| TraesCS2A01G466700.3 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.38 | 16.06 |
| TraesCS2B01G489500.1 | Wheat | plastid | 30.96 | 15.98 |
| Zm00001d024251_P001 | Maize | cytosol | 32.22 | 15.81 |
| CDY21732 | Canola | cytosol | 16.74 | 15.75 |
| TraesCS2D01G466700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.96 | 15.74 |
| CDX83890 | Canola | nucleus, plastid | 23.85 | 15.57 |
| CDX96751 | Canola | nucleus, plastid | 23.43 | 15.3 |
| CDY19175 | Canola | nucleus, plastid | 24.27 | 15.1 |
| Zm00001d026333_P001 | Maize | cytosol | 29.29 | 14.86 |
| CDX82101 | Canola | nucleus | 11.3 | 14.75 |
| CDY48040 | Canola | nucleus, plastid | 23.85 | 14.54 |
| CDY26215 | Canola | mitochondrion | 25.1 | 14.49 |
| CDX82103 | Canola | plastid | 17.99 | 13.74 |
| CDY09981 | Canola | nucleus | 31.8 | 11.89 |
| CDY06203 | Canola | nucleus | 31.8 | 11.8 |
| CDY13699 | Canola | nucleus | 20.5 | 10.72 |
| CDX86532 | Canola | nucleus | 31.38 | 10.64 |
| CDX83673 | Canola | nucleus | 20.5 | 9.84 |
| CDX84396 | Canola | nucleus | 23.43 | 9.14 |
| CDY20057 | Canola | nucleus | 19.67 | 7.29 |
| CDY43984 | Canola | endoplasmic reticulum | 12.97 | 7.09 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 9.21 | 6.04 |
| CDY31648 | Canola | nucleus | 10.46 | 5.88 |
| CDX84278 | Canola | nucleus | 10.46 | 5.71 |
| CDX90608 | Canola | cytosol | 8.37 | 5.62 |
| CDY16729 | Canola | nucleus | 26.36 | 5.52 |
| CDY48139 | Canola | nucleus | 14.64 | 3.96 |
| CDX70357 | Canola | plastid | 1.26 | 0.76 |
| CDY72432 | Canola | cytosol | 0.0 | 0.0 |
| CDY68605 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX78390 | EnsemblPlantsGene:GSBRNA2T00129766001 | Gene3D:1.20.1270.220 | InterPro:IPR027353 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | PFAM:PF17035 | PFscan:PS51525 | ProteinID:CDX78390 |
| ProteinID:CDX78390.1 | SEG:seg | UniParc:UPI0004EDDCE8 | MapMan:35.1 | : | : |
Description
BnaA03g03020D
Coordinates
chrLK031815:-:567845..569074
Molecular Weight (calculated)
25700.9 Da
IEP (calculated)
4.433
GRAVY (calculated)
-0.905
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MELPRVPSPP PSPPVSKVES PPQPPQPVNQ VEASVEVGEA PKGRKGKLPK PKAKDPNKRE MTMEEKAKLG VNLQELPPEK LGQLIQILKK RTTNLPQDGD
101: EIELDIEELD NETLWELDRF VTNYKKMASK IKRQGFIQNL STPTRNMPPV MEMGSAEKRV RKGGDGGEED VDIGEDIPIE DYPSVEIERD GTAATAGSSS
201: SGSSSSSGGS SSSDSESGSS SGSDSDADSV QSPFVQAKE
101: EIELDIEELD NETLWELDRF VTNYKKMASK IKRQGFIQNL STPTRNMPPV MEMGSAEKRV RKGGDGGEED VDIGEDIPIE DYPSVEIERD GTAATAGSSS
201: SGSSSSSGGS SSSDSESGSS SGSDSDADSV QSPFVQAKE
001: MAPAVLANLN EPLFLGQCGA VFMRKYTNQP LSGDINNPLF NPNPNPNSIS AYGNNSSKHF DDSSAYGDYV SFDLDGYTSN QLRELKKRLN SELEEVRFLR
101: ERIESGTFVS GSVYTTQARS FAGETNDVGV KKTKTKKKKI GHGQKRSNPF ATDEPSLKRH VALDLMSEKV LKSMMTTCGQ ILVKLMKHKW SWVFLNPVDV
201: VGLGLHDYHR IVDKPMDLGT VKMNLEKGLY RSPIDFASDV RLTFTNAMSY NPKGQDVYLM AEKLLSQFDV WFNPTLKRFE AQEVKVMGSS SRPGPEDNQR
301: VWNQNNVAEN ARKGPEQISI AKKLDSVKPL LPTLPPPPVI EITRDPSPPP SPVQPPPPPS PPPQPVNQVE ASLEVRETNK GRKGKLPKPK AKDPNKREMT
401: MDEKGKLGVN LQELPPEKLG QLIQILRKRT RDLPQDGDEI ELDIEALDNE TLWELDRFVT NYRKMASKIK RQGFIQNVST PPRNMPPVTE MGSAEKRGRK
501: GGEAGEEDVD IGEDIPVEDY PSVEIERDGT AAAASGGSSS SGSFSSSGSS SSSDSESGSS SGSDSDADSV QSPFVEAKEA P
101: ERIESGTFVS GSVYTTQARS FAGETNDVGV KKTKTKKKKI GHGQKRSNPF ATDEPSLKRH VALDLMSEKV LKSMMTTCGQ ILVKLMKHKW SWVFLNPVDV
201: VGLGLHDYHR IVDKPMDLGT VKMNLEKGLY RSPIDFASDV RLTFTNAMSY NPKGQDVYLM AEKLLSQFDV WFNPTLKRFE AQEVKVMGSS SRPGPEDNQR
301: VWNQNNVAEN ARKGPEQISI AKKLDSVKPL LPTLPPPPVI EITRDPSPPP SPVQPPPPPS PPPQPVNQVE ASLEVRETNK GRKGKLPKPK AKDPNKREMT
401: MDEKGKLGVN LQELPPEKLG QLIQILRKRT RDLPQDGDEI ELDIEALDNE TLWELDRFVT NYRKMASKIK RQGFIQNVST PPRNMPPVTE MGSAEKRGRK
501: GGEAGEEDVD IGEDIPVEDY PSVEIERDGT AAAASGGSSS SGSFSSSGSS SSSDSESGSS SGSDSDADSV QSPFVEAKEA P
Arabidopsis Description
GTE2Transcription factor GTE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.