Factsheet for Zm00001d053022_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004790_P008	Maize	nucleus	82.38	87.37
EES09393	Sorghum	nucleus	79.28	80.33
TraesCS7D01G526000.1	Wheat	nucleus, plastid	56.12	63.7
TraesCS7A01G539800.2	Wheat	nucleus, plastid	56.28	62.84
TraesCS7B01G461100.3	Wheat	nucleus, plastid	55.46	62.16
Os07t0507700-01	Rice	nucleus	53.83	54.91
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	17.62	47.37
HORVU7Hr1G118300.1	Barley	cytosol	54.49	46.91
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	5.38	42.31
KRH11112	Soybean	nucleus	26.43	28.67
KRH21136	Soybean	nucleus	25.94	28.09
AT5G46550.1	Thale cress	cytosol	21.86	27.13
VIT_10s0003g02240.t01	Wine grape	nucleus	24.96	26.7
Solyc02g071510.2.1	Tomato	nucleus	24.96	26.06
PGSC0003DMT400018643	Potato	nucleus	25.45	25.74
Bra022044.1-P	Field mustard	nucleus	21.86	25.52
GSMUA_Achr4P27780_001	Banana	nucleus	27.41	24.93
CDY43984	Canola	endoplasmic reticulum	17.29	24.26
Zm00001d017126_P001	Maize	nucleus	23.65	20.83
Zm00001d035167_P001	Maize	nucleus	25.45	20.58
Zm00001d049638_P009	Maize	nucleus	24.63	19.43
Zm00001d008922_P001	Maize	plastid	12.56	15.71
Zm00001d002267_P001	Maize	plastid	11.09	15.08
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	8.97	15.07
Zm00001d049400_P001	Maize	plastid	11.75	14.88
Zm00001d024251_P001	Maize	cytosol	11.58	14.58
Zm00001d026333_P001	Maize	cytosol	10.93	14.23
Zm00001d016131_P006	Maize	nucleus	12.56	11.48
Zm00001d053427_P007	Maize	nucleus	10.93	9.81
Zm00001d046528_P001	Maize	cytosol	1.96	8.0
Zm00001d039369_P004	Maize	plastid	12.07	7.9

Protein Annotations

Gene3D:1.20.920.10	EntrezGene:100383886	MapMan:15.5.54	ProteinID:AQK58570.1	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487
InterPro:IPR036427	UniProt:K7UCQ4	PFAM:PF00439	PRINTS:PR00503	PFscan:PS50014	PANTHER:PTHR22880
PANTHER:PTHR22880:SF230	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI000221A9D2	EnsemblPlantsGene:Zm00001d053022	EnsemblPlants:Zm00001d053022_P001
EnsemblPlants:Zm00001d053022_T001	SEG:seg	:	:	:	:

Description

Transcription factor GTE12

Coordinates

chr4:-:209718384..209734577

Molecular Weight (calculated)

67888.1 Da

IEP (calculated)

6.382

GRAVY (calculated)

-0.650

Length

613 amino acids

Sequence
(BLAST)

001: MMAQACKKRR GVYISTELGG SDTDSDVEGS KPSKKSGVTS ISTCEHQSSY NLKAASMKSS RMIRLCGNIV RKLIDHKGGW LFKDPVDPDL YKIPDYFDVI
101: RNPMDLGTVK NKLTKKKYVS IEEFAADVRL TFSNAMKYNP PGNDVHAFAR ELNEIFDSEW ESVERKFRGR NLVQEQKTKA IKVRAIVDSK STVARGQVAC
201: SNPKSLAARG PVPCSNSFAK KTLTDALSSK VKIKFSVRSS AHTSSKDIPV QTAGVKEGSL NHSFPTGNKE AYLNCTFPFA KENAKISSTR ETERSSGSTG
301: NDSWSCNDIS TSPIASSVQG EESYLCDEPL SPSRALRAAM LRSRFAGTIV KAQQKALLDH GKNIDPVKLQ LEKERLEKRQ QEEKARIEAQ VKAAEAAAQQ
401: KFEEEMRVKR EQEREAARLA VRMMKKTVDI DNSDFLKELE NFSKTWQSNP PGKLIVDFID GDLPPGLGSP LERLGLFMKN DLEDEVEQEV EDSASPSMDV
501: DMRKDLAGHE MQDSISPVKV IGTKDDFQGA DINTRKDFQE DAAGHEMQDC ISAVKVIGTK DDFQGAVGHE MANSLSPSTF VDTKKYSEGT EHEMVDSISP
601: LMDPNTEEGE ISC

Best Arabidopsis Sequence Match ( AT5G46550.1 )
(BLAST)

001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL

Arabidopsis Description

GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.