Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66497 | Canola | nucleus | 37.95 | 40.65 |
| CDY26219 | Canola | nucleus | 37.35 | 33.33 |
| Zm00001d008922_P001 | Maize | plastid | 75.9 | 25.71 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 76.51 | 25.1 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 76.51 | 24.9 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 75.9 | 24.71 |
| Solyc10g008070.2.1 | Tomato | nucleus | 43.37 | 19.89 |
| CDY15568 | Canola | nucleus | 37.95 | 19.87 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 36.14 | 19.29 |
| CDX96751 | Canola | nucleus, plastid | 37.35 | 16.94 |
| CDX83890 | Canola | nucleus, plastid | 36.75 | 16.67 |
| CDY19175 | Canola | nucleus, plastid | 37.95 | 16.41 |
| EES02258 | Sorghum | plastid | 42.77 | 15.92 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 25.9 | 15.64 |
| CDX82101 | Canola | nucleus | 16.87 | 15.3 |
| Bra025948.1-P | Field mustard | mitochondrion | 37.35 | 14.98 |
| CDY26215 | Canola | mitochondrion | 37.35 | 14.98 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 42.77 | 13.84 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 10.24 | 13.71 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 36.14 | 13.64 |
| CDY21732 | Canola | cytosol | 20.48 | 13.39 |
| KRH27020 | Soybean | nucleus | 51.2 | 13.16 |
| KRH22304 | Soybean | nucleus | 50.6 | 13.12 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 46.99 | 13.07 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 30.12 | 12.76 |
| CDY48040 | Canola | nucleus, plastid | 30.12 | 12.76 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 37.35 | 12.73 |
| AT1G73150.1 | Thale cress | plastid | 34.94 | 12.58 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 49.4 | 12.54 |
| PGSC0003DMT400027387 | Potato | nucleus | 42.77 | 12.33 |
| Os04t0622800-00 | Rice | cytosol | 22.29 | 11.9 |
| Os02t0250300-01 | Rice | nucleus | 46.39 | 11.74 |
| Os08t0192800-01 | Rice | nucleus | 30.72 | 10.6 |
| CDY06203 | Canola | nucleus | 40.96 | 10.56 |
| CDY09981 | Canola | nucleus | 40.36 | 10.49 |
| Zm00001d039369_P004 | Maize | plastid | 58.43 | 10.35 |
| PGSC0003DMT400032373 | Potato | nucleus | 45.78 | 10.26 |
| Bra032431.1-P | Field mustard | nucleus | 40.36 | 10.2 |
| Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 27.71 | 10.09 |
| CDX82103 | Canola | plastid | 18.67 | 9.9 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 20.48 | 9.58 |
| Solyc12g014170.1.1 | Tomato | nucleus | 39.16 | 9.27 |
| KRH25703 | Soybean | nucleus | 48.8 | 9.27 |
| PGSC0003DMT400039787 | Potato | nucleus | 39.16 | 9.23 |
| CDX86532 | Canola | nucleus | 37.35 | 8.79 |
| Bra015485.1-P | Field mustard | nucleus | 39.16 | 8.68 |
| Bra030643.1-P | Field mustard | nucleus | 38.55 | 8.66 |
| AT1G06230.2 | Thale cress | nucleus | 39.76 | 8.62 |
| KRH55813 | Soybean | nucleus | 50.0 | 8.43 |
| Solyc07g062660.2.1 | Tomato | nucleus | 37.95 | 8.38 |
| Os01t0648700-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 9.04 | 6.3 |
| Os02t0601800-03 | Rice | nucleus | 22.29 | 5.18 |
| Os07t0507700-01 | Rice | nucleus | 10.84 | 3.0 |
| Os08t0127300-01 | Rice | cytosol | 0.0 | 0.0 |
| CDY68605 | Canola | cytosol | 0.0 | 0.0 |
| CDY72432 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0214300-01 | EnsemblPlantsGene:Os01g0214300 | Gene3D:1.20.1270.220 | InterPro:IPR027353 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF181 | PFAM:PF17035 | PFscan:PS51525 | ProteinID:BAS71009.1 |
| SEG:seg | UniParc:UPI0000DD8A00 | UniProt:A0A0N7KCJ7 | MapMan:35.2 | : | : |
Description
Conserved hypothetical protein. (Os01t0214300-01)
Coordinates
chr1:+:6248293..6253373
Molecular Weight (calculated)
18256.0 Da
IEP (calculated)
4.031
GRAVY (calculated)
-1.217
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: RNLSLSQHDD EIEVDIDSFD VETLWELDRF VTNYKKSISK NKRKAENPVA GQDEMNHDIE LEKTEHARLD EVEQDQMPPV QETLHNPEPE SIDIEPPKEN
101: TADDNERYVG SSSPVHLEDQ KGENAGRSSS SGSSSSDSGS SSSAYADTDT DSSSADGSDA AQSPRT
101: TADDNERYVG SSSPVHLEDQ KGENAGRSSS SGSSSSDSGS SSSAYADTDT DSSSADGSDA AQSPRT
001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV
Arabidopsis Description
GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.