Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G265200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 77.31 | 85.58 |
| TraesCS3B01G265300.1 | Wheat | cytosol, nucleus, plastid | 68.49 | 74.09 |
| Os01t0648700-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 48.32 | 48.32 |
| KXG33001 | Sorghum | plastid | 39.92 | 41.85 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 31.09 | 14.51 |
| TraesCS1B01G385900.1 | Wheat | cytosol | 19.75 | 13.74 |
| TraesCS2B01G489500.1 | Wheat | plastid | 24.79 | 12.74 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 21.85 | 9.51 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 26.05 | 8.27 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 24.37 | 8.13 |
| TraesCS6B01G244000.2 | Wheat | plastid | 23.95 | 7.92 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 22.69 | 7.55 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G052900.1 | EnsemblPlantsGene:TraesCS5B01G052900 | Gene3D:1.20.920.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:IPR001487 | InterPro:IPR036427 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 |
| PFAM:PF00439 | PFscan:PS50014 | PRINTS:PR00503 | SMART:SM00297 | SUPFAM:SSF47370 | MapMan:15.5.54 |
Description
No Description!
Coordinates
chr5B:+:57684395..57685917
Molecular Weight (calculated)
26765.4 Da
IEP (calculated)
8.475
GRAVY (calculated)
-0.271
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSQSSPPVA LPGFPKKPMH HLTAADLPRA LERYRRLLDK LLQHEDGWVF AKPVDTHSLK LRDYLSIIAE PMDLGTVSRR LELCRYPNLL CFAKDVRRTF
101: SNAMTYNNKG DDVYESAAKL SRIFESGWVS ILAALPSPPP VTVHRARLKD ELPWLPVDLQ GKAVVIMKDI GGWIQEVDGR VEVDFDKADK ATLDKLEWLL
201: ALAIIRKCRP LDSPSASPFG HGVIPGLSEW ERGHVREG
101: SNAMTYNNKG DDVYESAAKL SRIFESGWVS ILAALPSPPP VTVHRARLKD ELPWLPVDLQ GKAVVIMKDI GGWIQEVDGR VEVDFDKADK ATLDKLEWLL
201: ALAIIRKCRP LDSPSASPFG HGVIPGLSEW ERGHVREG
001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV
Arabidopsis Description
GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.