Factsheet for GSMUA_AchrUn_randomP17090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr2P20970_001
GSMUA_Achr3P02660_001
GSMUA_Achr3P02670_001
GSMUA_Achr6P25560_001
GSMUA_Achr7P18000_001
GSMUA_Achr8P01140_001
GSMUA_Achr8P08920_001
GSMUA_Achr8P16990_001
GSMUA_Achr9P08680_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	GSMUA_Achr7P18000_001	AT1G26830.1	15772280
AT3G48360.1	GSMUA_Achr8P16990_001	AT1G26830.1	15772280
AT3G48360.1	GSMUA_AchrUn_...	AT1G26830.1	15772280
AT3G48360.1	GSMUA_AchrUn_...	AT1G26830.1	15772280
AT3G48360.1	GSMUA_Achr10P...	AT1G35670.1	19130088
AT3G48360.1	GSMUA_Achr2P08110_001	AT1G35670.1	19130088
AT3G48360.1	GSMUA_Achr6P25560_001	AT1G35670.1	19130088
AT3G48360.1	GSMUA_Achr9P08680_001	AT1G35670.1	19130088
AT3G48360.1	GSMUA_Achr10P...	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr2P20970_001	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr3P02660_001	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr3P02670_001	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr8P01140_001	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr8P08920_001	AT3G01770.1	15316289
AT3G48360.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT3G48360.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT3G48360.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT3G48360.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088
AT5G63160.1	GSMUA_Achr7P18000_001	AT1G26830.1	15772280
AT5G63160.1	GSMUA_Achr8P16990_001	AT1G26830.1	15772280
AT5G63160.1	GSMUA_AchrUn_...	AT1G26830.1	15772280
AT5G63160.1	GSMUA_AchrUn_...	AT1G26830.1	15772280
AT5G63160.1	GSMUA_Achr10P...	AT3G01770.1	15316289
AT5G63160.1	GSMUA_Achr2P20970_001	AT3G01770.1	15316289
AT5G63160.1	GSMUA_Achr3P02660_001	AT3G01770.1	15316289
AT5G63160.1	GSMUA_Achr3P02670_001	AT3G01770.1	15316289
AT5G63160.1	GSMUA_Achr8P01140_001	AT3G01770.1	15316289
AT5G63160.1	GSMUA_Achr8P08920_001	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02050_001	Banana	cytosol	75.64	78.3
GSMUA_Achr6P12110_001	Banana	nucleus	62.89	64.16
TraesCS2A01G323000.1	Wheat	cytosol	52.69	54.87
TraesCS2D01G339900.1	Wheat	cytosol	52.69	54.87
TraesCS2B01G359600.1	Wheat	cytosol	52.41	54.57
Zm00001d025707_P001	Maize	cytosol	52.12	53.96
HORVU2Hr1G083410.1	Barley	cytosol	11.9	52.5
Os04t0482300-01	Rice	cytosol	52.69	52.39
TraesCS2B01G359400.1	Wheat	cytosol	51.27	52.31
TraesCS2A01G323200.1	Wheat	cytosol	51.27	52.31
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	52.97	51.66
PGSC0003DMT400069397	Potato	nucleus	47.59	50.45
GSMUA_AchrUn_...	Banana	nucleus	48.73	50.0
GSMUA_Achr11P...	Banana	nucleus	49.86	49.58
VIT_17s0000g09790.t01	Wine grape	cytosol	48.44	49.28
EES05370	Sorghum	plastid	49.29	48.88
KRH57174	Soybean	cytosol	30.31	48.42
TraesCS2D01G339700.1	Wheat	cytosol	51.56	48.02
Solyc06g071820.2.1	Tomato	nucleus	47.31	47.85
Solyc03g111710.2.1	Tomato	nucleus	46.74	47.83
PGSC0003DMT400039384	Potato	nucleus	46.74	47.83
KRH03892	Soybean	cytosol	46.46	47.4
CDY41504	Canola	nucleus	44.48	47.29
KRH63672	Soybean	nucleus	42.78	46.18
PGSC0003DMT400069392	Potato	nucleus	45.61	46.13
Bra038612.1-P	Field mustard	nucleus	47.31	46.01
Solyc06g071830.2.1	Tomato	nucleus	43.34	45.95
AT3G48360.1	Thale cress	nucleus	47.31	45.88
Zm00001d017101_P001	Maize	plastid	47.59	45.53
Bra029235.1-P	Field mustard	nucleus	47.31	45.38
AT5G63160.1	Thale cress	nucleus	46.74	45.21
CDY48173	Canola	nucleus	46.46	45.18
CDX84392	Canola	nucleus	46.18	45.03
CDY70710	Canola	nucleus	19.83	44.59
GSMUA_Achr6P12420_001	Banana	nucleus	45.33	43.01
Bra018065.1-P	Field mustard	nucleus	45.61	42.59
CDY30743	Canola	nucleus	47.31	42.07
KRH37914	Soybean	cytosol	11.9	42.0
CDY39576	Canola	nucleus	43.34	41.69
CDY45741	Canola	nucleus	46.74	41.56
HORVU2Hr1G083490.1	Barley	extracellular	9.35	37.93
HORVU2Hr1G083430.3	Barley	nucleus	18.41	37.14
GSMUA_Achr6P24750_001	Banana	nucleus	37.11	34.47
GSMUA_Achr6P18360_001	Banana	plastid	34.28	31.68
Os02t0596700-00	Rice	plastid	18.7	22.15

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG17090_001	EnsemblPlants:GSMUA_AchrUn_randomP17090_001
EnsemblPlants:GSMUA_AchrUn_randomT17090_001	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898	UniProt:M0U9W8	PFAM:PF00651
PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI0002956A35
InterPro:Znf_TAZ	SEG:seg	:	:	:	:

Description

BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17090_001]

Coordinates

chrchrUn_random:+:80866543..80868806

Molecular Weight (calculated)

40294.9 Da

IEP (calculated)

9.897

GRAVY (calculated)

-0.472

Length

353 amino acids

Sequence
(BLAST)

001: MTASVTHRNG LIRRWHEAGN ECVPPTDVQI VTSDGKSIPA HSSVLASASP VLERMLDRSR KGGNSERIIH VLGVPHDAVL VFLQFLYSSG TGMWSREAEE
101: EMERHGMALL ALSHAYRVRW LKRRCEAGVA AWLSAVKVMD VLKLARLCDA PRLYQRCMRL VAKDLEAVQQ SEGWRFVQKH DPGLETEVLQ LLQETSQRGK
201: RWRRERGDQD KYRQLSEAMD CLQHICTEGC TDVGPHNSRP PAYPCTSFST CEGLQLLIRH FAACGRKLSP KGCTHCKRMW QLLRLHSSLC DQPDSCRVPL
301: CEQFKKKVQE EKVDRTWRLL VKKVATARVM SSLANRKVPE IVQKSRVRYR GTR

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.