Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr7P18000_001 | |
| GSMUA_Achr8P16990_001 | |
| GSMUA_AchrUn_... | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009478_P001 | Maize | extracellular | 22.77 | 56.49 |
| TraesCS3A01G400400.1 | Wheat | cytosol | 55.76 | 53.79 |
| Zm00001d035819_P001 | Maize | extracellular | 20.94 | 52.98 |
| VIT_05s0094g00950.t01 | Wine grape | cytosol, plastid | 54.71 | 51.35 |
| TraesCS3B01G433400.1 | Wheat | nucleus | 53.66 | 51.25 |
| GSMUA_Achr6P24750_001 | Banana | nucleus | 49.74 | 50.0 |
| AT1G05690.1 | Thale cress | plastid | 46.6 | 48.9 |
| Os01t0893400-01 | Rice | nucleus | 52.62 | 48.67 |
| HORVU3Hr1G090000.4 | Barley | nucleus | 54.19 | 48.36 |
| PGSC0003DMT400064939 | Potato | nucleus | 50.79 | 48.14 |
| OQU88021 | Sorghum | nucleus | 52.36 | 47.06 |
| Solyc08g014440.2.1 | Tomato | nucleus | 45.29 | 45.65 |
| CDY10140 | Canola | plastid | 43.19 | 44.96 |
| Zm00001d042549_P001 | Maize | nucleus | 51.05 | 44.62 |
| PGSC0003DMT400013718 | Potato | cytosol | 28.53 | 41.29 |
| CDX86561 | Canola | nucleus | 43.98 | 40.1 |
| CDY15554 | Canola | nucleus | 44.5 | 40.09 |
| Bra030621.1-P | Field mustard | endoplasmic reticulum | 44.24 | 36.74 |
| GSMUA_Achr11P... | Banana | nucleus | 33.77 | 36.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.2 | 35.76 |
| Solyc12g019420.1.1 | Tomato | cytosol | 23.04 | 34.78 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 31.68 | 34.28 |
| Zm00001d046179_P001 | Maize | cytosol, endoplasmic reticulum | 16.49 | 33.87 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 30.63 | 33.81 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 29.06 | 32.55 |
| GSMUA_Achr6P12420_001 | Banana | nucleus | 28.8 | 29.57 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005516 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009553 | GO:GO:0009555 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016573 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042542 | EnsemblPlantsGene:GSMUA_Achr6G18360_001 | EnsemblPlants:GSMUA_Achr6P18360_001 |
| EnsemblPlants:GSMUA_Achr6T18360_001 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | UniProt:M0T834 | PFAM:PF00651 |
| PFAM:PF02135 | PFscan:PS50097 | PFscan:PS50134 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF140 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf |
| UniParc:UPI0002965B8F | InterPro:Znf_TAZ | : | : | : | : |
Description
BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G18360_001]
Coordinates
chr6:+:12635913..12638996
Molecular Weight (calculated)
43263.2 Da
IEP (calculated)
9.319
GRAVY (calculated)
-0.238
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSYKTFN VPDACRSHQL NSGRSVPQPP PVHGSSYGAR KCSKSLKDDT YVPDETRIAW DKLFYEGYGA DVHVLTKDKD IILAHSSILG ISSPVLRNLL
101: EQARVIKGFR KITIQGVPSE AARAFIRFLY SSCCEPDLMK NFVLHLLVLS HAFAIPSLKR TCIKLIEQEV LTEENVVDVL QLARLCDAPR LSLSCTKMIL
201: NDFKAISLSD GWKAMKQANP SLEQELLESL VGEDSKRQDR LKKMEERKVY MQLYEAMEAL LHICRDGCRT IGPHDKMPKD SETTCKYAAC KGIESLVRHF
301: KGCRIRVPGG CMHCKRMWQI LRLHSQMCSE PDLCKVPLCS HFKDKMKSLS KREEFKWKLL VSKIMAAKGT INSILARRLL LG
101: EQARVIKGFR KITIQGVPSE AARAFIRFLY SSCCEPDLMK NFVLHLLVLS HAFAIPSLKR TCIKLIEQEV LTEENVVDVL QLARLCDAPR LSLSCTKMIL
201: NDFKAISLSD GWKAMKQANP SLEQELLESL VGEDSKRQDR LKKMEERKVY MQLYEAMEAL LHICRDGCRT IGPHDKMPKD SETTCKYAAC KGIESLVRHF
301: KGCRIRVPGG CMHCKRMWQI LRLHSQMCSE PDLCKVPLCS HFKDKMKSLS KREEFKWKLL VSKIMAAKGT INSILARRLL LG
001: MQGREDKLNK RMVTGCVDLH QSFKSADSSS VPIPPPLPSK SDGLKKKLGH SSVSTATRDM WDRLFNDGYK ADVVIYTDNG SIIYAHANIL GTASTVIKGM
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC
Arabidopsis Description
BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.