Factsheet for Bra030621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016291.1-P
Bra024680.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	Bra016291.1-P	AT1G26830.1	15772280
AT1G05690.1	Bra024680.1-P	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15554	Canola	nucleus	90.22	97.88
AT1G05690.1	Thale cress	plastid	58.04	73.35
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	45.87	51.84
Zm00001d009478_P001	Maize	extracellular	17.17	51.3
Zm00001d035819_P001	Maize	extracellular	15.87	48.34
Solyc08g014440.2.1	Tomato	nucleus	39.57	48.02
PGSC0003DMT400064939	Potato	nucleus	41.96	47.89
PGSC0003DMT400013718	Potato	cytosol	25.87	45.08
TraesCS3A01G400400.1	Wheat	cytosol	38.48	44.7
TraesCS3B01G433400.1	Wheat	nucleus	38.7	44.5
GSMUA_Achr6P18360_001	Banana	plastid	36.74	44.24
Os01t0893400-01	Rice	nucleus	37.83	42.13
Bra024446.1-P	Field mustard	cytosol	34.78	42.11
OQU88021	Sorghum	nucleus	38.7	41.88
HORVU3Hr1G090000.4	Barley	nucleus	38.48	41.36
Zm00001d042549_P001	Maize	nucleus	38.7	40.73
Solyc12g019420.1.1	Tomato	cytosol	21.52	39.13
Bra017839.1-P	Field mustard	nucleus	31.74	38.52
Bra011776.1-P	Field mustard	nucleus, plastid	31.09	38.24
Bra038612.1-P	Field mustard	nucleus	28.04	35.54
Bra029235.1-P	Field mustard	nucleus	27.61	34.51
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	13.91	34.41
Bra018065.1-P	Field mustard	nucleus	26.96	32.8

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
EnsemblPlantsGene:Bra030621	EnsemblPlants:Bra030621.1	EnsemblPlants:Bra030621.1-P	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824
GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009409
GO:GO:0009553	GO:GO:0009555	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723
GO:GO:0009751	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016573
GO:GO:0016740	GO:GO:0019538	GO:GO:0042542	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
UniProt:M4EPA1	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PFscan:PS50134	PANTHER:PTHR24413
PANTHER:PTHR24413:SF140	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695
SUPFAM:SSF57933	InterPro:TAZ_dom_sf	TMHMM:TMhelix	UniParc:UPI00025454E5	InterPro:Znf_TAZ	SEG:seg

Description

AT1G05690 (E=6e-140) BT3 | BT3 (BTB AND TAZ DOMAIN PROTEIN 3); protein binding / transcription regulator

Coordinates

chrA08:-:21045409..21047023

Molecular Weight (calculated)

52228.6 Da

IEP (calculated)

9.189

GRAVY (calculated)

-0.140

Length

460 amino acids

Sequence
(BLAST)

001: MIKDSSSFFS LPLFFVGFEH FSIVTVSGFC LLYLAMMNCE TENLYVYFVS KFRTLWSMLS SHVRLLTLWS MLCRFKNCNI IYSQVAGFDS MASSEVSTCA
101: KNIPKPPPLP RVTYQASRSK PSSSSSRLVP QETIETWDKL FKEGTGADTY VEVDNKSHFL AHSYILAAAS PVMPQLLHQS RDKKGNSHLK FLGVPQEAVY
201: MFIRFLYSCS YEEEDMKKYV LPLLVLSHCY SVPSLKRVCV EVLGQGWINK ENVIDVLQLA RTCDAARISF LCVSMVIRDF KSVSSTEGWK VMTRGDRKLE
301: QELLEAVVEA DARKKERRKK VEERRMYLEL YEAVEALVHI YREGCGTIGP RGKALKGSKA VCEFSACKGV EGGLRHFLGC KSARASCGHC KRMWQLIQLH
401: SCLCGSSDSC EVPLCRNFKE KMKKISKREE SKWRLLAENV TTAAKRSLGP FYSSRRSALI

Best Arabidopsis Sequence Match ( AT1G05690.1 )
(BLAST)

001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI

Arabidopsis Description

BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.