Factsheet for Bra011776.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 2
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016291.1-P
Bra024680.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37610.1	Bra016291.1-P	AT1G26830.1	15772280
AT4G37610.1	Bra024680.1-P	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75666	Canola	nucleus	99.73	99.73
AT4G37610.1	Thale cress	nucleus	84.76	86.14
Bra017839.1-P	Field mustard	nucleus	85.29	84.17
Bra024446.1-P	Field mustard	cytosol	55.62	54.74
VIT_07s0129g00210.t01	Wine grape	cytosol, nucleus, plastid	53.74	54.18
Solyc02g092460.2.1	Tomato	mitochondrion, nucleus	39.57	51.57
KRH77116	Soybean	plastid	52.14	51.45
PGSC0003DMT400055194	Potato	nucleus	46.79	46.3
GSMUA_Achr6P24750_001	Banana	nucleus	46.26	45.53
Bra038612.1-P	Field mustard	nucleus	33.96	34.99
Bra018065.1-P	Field mustard	nucleus	34.22	33.86
Bra029235.1-P	Field mustard	nucleus	33.16	33.7
Bra030621.1-P	Field mustard	endoplasmic reticulum	38.24	31.09

Protein Annotations

Gene3D:1.20.1020.10	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra011776
EnsemblPlants:Bra011776.1	EnsemblPlants:Bra011776.1-P	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898	UniProt:M4D5L9	PFAM:PF00651	PFAM:PF02135
PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF145	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551
InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI0002546425	InterPro:Znf_TAZ
SEG:seg	:	:	:	:	:

Description

AT4G37610 (E=1e-179) BT5 | BT5 (BTB AND TAZ DOMAIN PROTEIN 5); protein binding / transcription regulator

Coordinates

chrA01:+:608220..609631

Molecular Weight (calculated)

42689.0 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.336

Length

374 amino acids

Sequence
(BLAST)

001: MENMDVISPE NASGPPSPPP PPVRSNSGTM WKKSTLQKCN IFASKATRDA WDRMFDEAHG ADVLIHTDDN GLIYAHSNVI GMASDVIRGL MKQDKRNSRR
101: KSISILGVPH DAVRVFIRFL YSSCYEKQDM EDFAMHLLVL SHVYVVPHLK RVCESHFENT LLNEGNVIDV FQLALLCDAP RLGLLCHRMI LKSFEEVSTS
201: QGWIAMKQSH PSLHKELVRS VSYELNNLKQ RNRKQKEIQT YTQLYDAMEA FVHICRDGCR EIGPTKIENP HVSCGFQACN GLEMLLKHLA VCKLRSIPGG
301: CSRCKRMWQL LELHSRICVD SEQCKVPLCS SFKERMKKQS RKDEKRWKLL VKNVLSTKRI GGSPFFLQAI DVTM

Best Arabidopsis Sequence Match ( AT4G37610.1 )
(BLAST)

001: MENMDDFSPE NVLAPPPPPP PMKKSTDLFM QRSNSFVSKA TRDSWDRMFD EAHGADVLIH TDDNGLIYAH SNVIGMASDV IRGMMKQHKR KSHRKSISIL
101: GVPHHALRVF IRFLYSSCYE KQDMEDFAIH LLVLSHVYVV PHLKRVCESE FESSLLNKEN VIDVFQLALL CDAPRLGLLC HRMILNNFEE VSTSEGWQAM
201: KESHPRLQKE LLRSVAYELN SLKQRNRKQK EIQTYTQLYE AMEAFVHICR DGCREIGPTK TETPHMSCGF QACNGLEQLL KHLAGCKLRS IPGGCSRCKR
301: MWQLLELHSR ICVDSEQCKV PLCSSLKERM KTQSRKDEKR WKLLVRNVLS TKRIGGSPFF LQAIDVTL

Arabidopsis Description

BT5BTB/POZ and TAZ domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6EJ98]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.