Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0026g02230.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G37610.1 | VIT_01s0026g02230.t01 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g092460.2.1 | Tomato | mitochondrion, nucleus | 50.94 | 65.85 |
| KRH77116 | Soybean | plastid | 61.99 | 60.69 |
| PGSC0003DMT400055194 | Potato | nucleus | 60.38 | 59.26 |
| CDY36495 | Canola | cytosol | 60.11 | 58.68 |
| AT5G67480.2 | Thale cress | cytosol | 59.84 | 57.96 |
| Bra024446.1-P | Field mustard | cytosol | 59.3 | 57.89 |
| CDY08721 | Canola | cytosol | 59.3 | 57.89 |
| GSMUA_Achr6P24750_001 | Banana | nucleus | 56.33 | 55.0 |
| AT4G37610.1 | Thale cress | nucleus | 54.45 | 54.89 |
| CDY29568 | Canola | nucleus | 55.26 | 54.09 |
| Bra017839.1-P | Field mustard | nucleus | 55.26 | 54.09 |
| CDY50978 | Canola | nucleus, plastid | 54.45 | 54.01 |
| CDX75666 | Canola | nucleus | 54.18 | 53.74 |
| Bra011776.1-P | Field mustard | nucleus, plastid | 54.18 | 53.74 |
| CDX72641 | Canola | nucleus, plastid | 54.99 | 53.68 |
| VIT_05s0094g00950.t01 | Wine grape | cytosol, plastid | 50.4 | 45.95 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 37.2 | 39.77 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | EntrezGene:100855250 | wikigene:100855250 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 |
| Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom | ProteinID:CBI33698 | ProteinID:CBI33698.3 | UniProt:D7TT76 | EMBL:FN596246 |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005516 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0016043 | GO:GO:0016573 |
| GO:GO:0016740 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042542 |
| GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | EntrezGene:LOC100855250 |
| wikigene:LOC100855250 | PFAM:PF00651 | PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF145 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 |
| InterPro:TAZ_dom_sf | UniParc:UPI00015C957D | ArrayExpress:VIT_07s0129g00210 | EnsemblPlantsGene:VIT_07s0129g00210 | EnsemblPlants:VIT_07s0129g00210.t01 | unigene:Vvi.19461 |
| RefSeq:XP_003632492 | RefSeq:XP_003632492.1 | InterPro:Znf_TAZ | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:+:15479858..15483090
Molecular Weight (calculated)
41962.7 Da
IEP (calculated)
9.244
GRAVY (calculated)
-0.198
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKADSISEG SPLLANGVPP VAPPLPGPAT TSYRQKGLVK DGRCSCVNAA VRDLWDRLFD EACGADVTIN TDNGGILYAH ASILGMSSPV MKGMLKQTRG
101: RGRWQSISIR GVPLDAVRVF IRFLYSSCYE QEDMDEFAVP LLVLSHVFVI PHLKRVCEHH LEHGLLTIDN VIDVFQLALL CDAPRLTLIC HRMILKNFKA
201: VANNEGWKAM KKSHPILEKE ILESVTEADT RQKQRVRRLN EKKIYLELYE AMEALVHICR DGCRTIGPYD KILKEDQAPC KYEACKGLEL LVRHFAGCKL
301: RAPGGCTHCK RMWQLLELHS RLCADSDICR VPLCRNFKDR IKKQSKKDEM KWRILVRKIL RAKGIGKAPF F
101: RGRWQSISIR GVPLDAVRVF IRFLYSSCYE QEDMDEFAVP LLVLSHVFVI PHLKRVCEHH LEHGLLTIDN VIDVFQLALL CDAPRLTLIC HRMILKNFKA
201: VANNEGWKAM KKSHPILEKE ILESVTEADT RQKQRVRRLN EKKIYLELYE AMEALVHICR DGCRTIGPYD KILKEDQAPC KYEACKGLEL LVRHFAGCKL
301: RAPGGCTHCK RMWQLLELHS RLCADSDICR VPLCRNFKDR IKKQSKKDEM KWRILVRKIL RAKGIGKAPF F
001: MQGREDKLNK RMVTGCVDLH QSFKSADSSS VPIPPPLPSK SDGLKKKLGH SSVSTATRDM WDRLFNDGYK ADVVIYTDNG SIIYAHANIL GTASTVIKGM
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC
Arabidopsis Description
BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.