Factsheet for Solyc02g092460.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g010820.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37610.1	Solyc01g010820.2.1	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055194	Potato	nucleus	94.77	71.96
VIT_07s0129g00210.t01	Wine grape	cytosol, nucleus, plastid	65.85	50.94
KRH77116	Soybean	plastid	63.41	48.02
CDY36495	Canola	cytosol	62.37	47.11
AT5G67480.2	Thale cress	cytosol	62.37	46.74
CDY08721	Canola	cytosol	61.67	46.58
Bra024446.1-P	Field mustard	cytosol	61.67	46.58
GSMUA_Achr6P24750_001	Banana	nucleus	60.98	46.05
AT4G37610.1	Thale cress	nucleus	52.96	41.3
CDY50978	Canola	nucleus, plastid	52.26	40.11
CDX75666	Canola	nucleus	51.57	39.57
Bra011776.1-P	Field mustard	nucleus, plastid	51.57	39.57
CDY29568	Canola	nucleus	51.57	39.05
Bra017839.1-P	Field mustard	nucleus	51.57	39.05
CDX72641	Canola	nucleus, plastid	51.22	38.68
Solyc06g071820.2.1	Tomato	nucleus	45.3	37.25
Solyc08g014440.2.1	Tomato	nucleus	49.13	37.2
Solyc03g111710.2.1	Tomato	nucleus	42.86	35.65
Solyc06g071830.2.1	Tomato	nucleus	40.07	34.53
Solyc12g019420.1.1	Tomato	cytosol	20.56	23.32

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197
InterPro:IPR000210	InterPro:IPR035898	UniProt:K4BD42	PFAM:PF00651	PFAM:PF02135	PFscan:PS50134
PANTHER:PTHR24413	PANTHER:PTHR24413:SF145	InterPro:SKP1/BTB/POZ_sf	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695
SUPFAM:SSF57933	EnsemblPlantsGene:Solyc02g092460.2	EnsemblPlants:Solyc02g092460.2.1	InterPro:TAZ_dom_sf	UniParc:UPI0002767F57	InterPro:Znf_TAZ

Description

No Description!

Coordinates

chr2:+:53510609..53512205

Molecular Weight (calculated)

33327.9 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.454

Length

287 amino acids

Sequence
(BLAST)

001: MLSLKQSRPH GRCGHQRSIT INGVPPEAVQ VFIRFLYSSR YEEEKMKEHG LSLLVLSHAY AVTHLKQECE WQLEQRLTTE NVVDIFQLAL LCDASRLSLV
101: CHRFMLKNFK PISATEGWKA MKQSHPVLEK QMLKSIIDED IREKERVRKS NERKMYMQLY EAMEALVHIC KDGCRTIGPH DKVLKEDQEP CHYAACKGLE
201: SLIRHFAGCK LRVPGGCIHC KRMWQVLELH SRLCANSDVC KVPLCRSFKQ KRRKQNKKDE MKWSILVRKI VRSKSISGAP FFSSEST

Best Arabidopsis Sequence Match ( AT5G67480.3 )
(BLAST)

001: MVTGCVDLHQ SFKSADSSSV PIPPPLPSKS DGLKKKLGHS SVSTATRDMW DRLFNDGYKA DVVIYTDNGS IIYAHANILG TASTVIKGML KQAKRHGKWH
101: TISIRGVPHD AVRVFIRFLY SSCYEKEEMN EFIMHLLLLS HAYVVPQLKR VCEWHLEHGL LTTENVVDVF QLALLCDFPR LSLISHRMIM KHFNELSATE
201: AWTAMKKSHP FLEKEVRDSV IIEANTRKER MRKRNDQRIY SQLYEAMEAL VHICRDGCKT IGPHDKDFKP NHATCNYEAC KGLESLIRHF AGCKLRVPGG
301: CVHCKRMWQL LELHSRVCAG SDQCRVPLCR NLKEKMEKQS KKDESRWKLL VKNVLGSKKI GGSPFFLPVT NC

Arabidopsis Description

BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.