CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024446.1-P	Field mustard	cytosol	99.74	99.74
CDY36495	Canola	cytosol	98.42	98.42
AT5G67480.2	Thale cress	cytosol	83.95	83.29
Solyc02g092460.2.1	Tomato	mitochondrion, nucleus	46.58	61.67
VIT_07s0129g00210.t01	Wine grape	cytosol, nucleus, plastid	57.89	59.3
PGSC0003DMT400055194	Potato	nucleus	56.84	57.14
KRH77116	Soybean	plastid	56.05	56.2
CDY50978	Canola	nucleus, plastid	55.0	55.88
CDX75666	Canola	nucleus	54.74	55.62
CDY29568	Canola	nucleus	54.47	54.62
CDX72641	Canola	nucleus, plastid	53.68	53.68
GSMUA_Achr6P24750_001	Banana	nucleus	52.11	52.11
CDY10140	Canola	plastid	37.37	38.69
CDX86561	Canola	nucleus	42.37	38.42
CDY41504	Canola	nucleus	32.89	37.65
CDY15554	Canola	nucleus	41.58	37.26
CDY39576	Canola	nucleus	33.95	35.15
CDY70710	Canola	nucleus	14.47	35.03
CDY48173	Canola	nucleus	33.42	34.99
CDX84392	Canola	nucleus	33.16	34.81
CDY45741	Canola	nucleus	33.95	32.49
CDY30743	Canola	nucleus	33.95	32.49

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	GO:A0A078F5M7
UniProt:A0A078F5M7	InterPro:BTB/POZ_dom	EnsemblPlants:CDY08721	ProteinID:CDY08721	ProteinID:CDY08721.1	GO:GO:0003674
GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016573	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00000645001	InterPro:IPR000197	InterPro:IPR000210
InterPro:IPR035898	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF145
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933
InterPro:TAZ_dom_sf	UniParc:UPI0004EEEBE1	InterPro:Znf_TAZ	SEG:seg	:	:

Description

BnaA06g25030DBnaA06g25030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5M7]

Coordinates

chrLK031989:-:33435..36038

Molecular Weight (calculated)

43579.1 Da

IEP (calculated)

9.240

GRAVY (calculated)

-0.357

Length

380 amino acids

Sequence
(BLAST)

001: MVMACVDLQK AADSSSVPIP PPLPSKSDGQ QKRYRNDVAP EHTCVPTATK DMWDRLFNDG YKANVVIYTD NGGIVYAHAN IIGTASSVIK GMLKQAKKHG
101: KWYTISIRGV PHEAVRVFIR FLYSSCYKKE EMNEYIMHLL LLSHAYVVPQ LKRVCEWHLE HGLLTTENVI DVFQLALLCD FPRLSVISHR TIMKHFKELY
201: ATEAWTAMKK SHPFLEKELR DSVFIEENAR KERIRKRNEE RIYSQLYEAM EALVHICRDG CKTIGPHDKD LKPNHATCHY EACKGLESLI RHFAGCKLRV
301: PGGCVHCKRM WQLLELHSRV CADSDQCRVP LCGNFKEKME KQSKKDEVRW KLLVKNVLGS KKIGASPFFL PVTRSSSTMS

Best Arabidopsis Sequence Match ( AT5G67480.2 )
(BLAST)

001: MQGREDKLNK RMVTGCVDLH QSFKSADSSS VPIPPPLPSK SDGLKKKLGH SSVSTATRDM WDRLFNDGYK ADVVIYTDNG SIIYAHANIL GTASTVIKGM
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC

Arabidopsis Description

BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.