Factsheet for Zm00001d042549_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018043_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	Zm00001d018043_P001	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009478_P001	Maize	extracellular	28.15	79.87
Zm00001d035819_P001	Maize	extracellular	26.32	76.16
OQU88021	Sorghum	nucleus	73.0	75.06
TraesCS3A01G400400.1	Wheat	cytosol	60.64	66.92
TraesCS3B01G433400.1	Wheat	nucleus	60.41	66.0
Os01t0893400-01	Rice	nucleus	59.27	62.71
HORVU3Hr1G090000.4	Barley	nucleus	60.41	61.68
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	48.97	52.58
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	21.74	51.08
GSMUA_Achr6P18360_001	Banana	plastid	44.62	51.05
PGSC0003DMT400064939	Potato	nucleus	46.68	50.62
AT1G05690.1	Thale cress	plastid	41.42	49.73
Solyc08g014440.2.1	Tomato	nucleus	41.42	47.76
CDX86561	Canola	nucleus	40.73	42.48
CDY15554	Canola	nucleus	40.27	41.51
CDY10140	Canola	plastid	34.78	41.42
Bra030621.1-P	Field mustard	endoplasmic reticulum	40.73	38.7
PGSC0003DMT400013718	Potato	cytosol	23.34	38.64
Zm00001d025707_P001	Maize	cytosol	29.06	37.24
Zm00001d042443_P001	Maize	cytosol	28.6	36.34
Solyc12g019420.1.1	Tomato	cytosol	20.14	34.78
Zm00001d017101_P001	Maize	plastid	25.63	30.35

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	UniProt:A0A1D6N541
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000197
InterPro:IPR000210	InterPro:IPR035898	ProteinID:ONM35748.1	ProteinID:ONM35750.1	PFAM:PF00651	PFAM:PF02135
PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF140	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551
InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI00022089C1	EnsemblPlantsGene:Zm00001d042549
EnsemblPlants:Zm00001d042549_P001	EnsemblPlants:Zm00001d042549_T001	InterPro:Znf_TAZ	SEG:seg	:	:

Description

BTB/POZ and TAZ domain-containing protein 3

Coordinates

chr3:-:171514199..171518312

Molecular Weight (calculated)

49078.7 Da

IEP (calculated)

9.109

GRAVY (calculated)

-0.276

Length

437 amino acids

Sequence
(BLAST)

001: MECVELLDSP DLFFLDGGDA HATDFSLENH LESSSSAGAK NKAAPGHSHI HSHSHSRRAQ LHRSNAPVPP PLPGTSYYGA RRKAKAACRR VPEGVLDSWD
101: RLFLEGYQSD LRVSTDGGAE ISSHSCVLGV KSPVLRAMLE EARLRDGFRC IRVSGAPSEA VRVFIRFLYS SRFEQEQMKE HALHLLVLSH VFSVPSLKTV
201: CVDQLERGFL ATDNVVDMLQ LARLCDAPRL ALACARMVIG DFKTISLTDG WKVMRRTNPS MEQELLESLV EADTRRQERA KRMEEKKVYL QLYEAMEALV
301: HICRDGCRTI GPRDQALKGS LAAACKFRAC KGIELLVRHF SACGVRVPGG CANCRRMWQL LELHSRMCFL PDTCKVPLCR HFKEKMRNLG RKEETKWNLL
401: VCKVLERGGT MGFMPGRRKN FINPKASWVL PRGSSCI

Best Arabidopsis Sequence Match ( AT1G05690.1 )
(BLAST)

001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI

Arabidopsis Description

BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.