Factsheet for Os01t0893400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	Os02t0746000-01	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G400400.1	Wheat	cytosol	63.68	66.41
TraesCS3B01G433400.1	Wheat	nucleus	63.68	65.75
OQU88021	Sorghum	nucleus	65.62	63.76
Zm00001d009478_P001	Maize	extracellular	23.49	62.99
HORVU3Hr1G090000.4	Barley	nucleus	63.44	61.22
Zm00001d035819_P001	Maize	extracellular	21.79	59.6
Zm00001d042549_P001	Maize	nucleus	62.71	59.27
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	52.3	53.07
GSMUA_Achr6P18360_001	Banana	plastid	48.67	52.62
AT1G05690.1	Thale cress	plastid	43.83	49.73
PGSC0003DMT400064939	Potato	nucleus	48.18	49.38
Solyc08g014440.2.1	Tomato	nucleus	43.83	47.76
CDY10140	Canola	plastid	37.77	42.51
PGSC0003DMT400013718	Potato	cytosol	26.88	42.05
CDX86561	Canola	nucleus	42.13	41.53
CDY15554	Canola	nucleus	42.37	41.27
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	17.92	39.78
Bra030621.1-P	Field mustard	endoplasmic reticulum	42.13	37.83
Solyc12g019420.1.1	Tomato	cytosol	21.55	35.18
Os01t0908200-01	Rice	cytosol	29.3	34.87
Os04t0482300-01	Rice	cytosol	29.3	34.08
Os02t0596700-00	Rice	plastid	12.35	17.11

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	EntrezGene:4324958
EMBL:AK071112	ProteinID:BAD87545.1	ProteinID:BAF06978.1	ProteinID:BAS75678.1	InterPro:BTB/POZ_dom	ncoils:Coil
ProteinID:EEE55796.1	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009409
GO:GO:0009553	GO:GO:0009555	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723
GO:GO:0009751	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042542	GO:GO:0043161	InterPro:IPR000197
InterPro:IPR000210	InterPro:IPR035898	EnsemblPlantsGene:Os01g0893400	EnsemblPlants:Os01t0893400-01	PFAM:PF00651	PFAM:PF02135
PFscan:PS50097	PFscan:PS50134	PANTHER:PTHR24413	PANTHER:PTHR24413:SF140	UniProt:Q5JLW2	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf
UniParc:UPI00004C29EB	RefSeq:XP_015640130.1	InterPro:Znf_TAZ	SEG:seg	:	:

Description

Zinc finger, TAZ-type domain containing protein. (Os01t0893400-01);Zinc finger, TAZ-type domain containing protein. (Os01t0893400-02)

Coordinates

chr1:+:38843729..38846523

Molecular Weight (calculated)

47053.2 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.255

Length

413 amino acids

Sequence
(BLAST)

001: MACLELDSSQ FLLNGDGSVI GSPFDIQLEC NSFTGSKAVQ DHSRYTLPSQ CTNAPDPPPL PGTSYGTHRT SRNAKACRCV PEEIQDFWDR MFFEAYQYDL
101: RVLTEDGNEI MSHSCVVGIK SPVLRAMLEE AKVQGGIRHI LIPGVPSEAV HVFIRFLYSS RFEQYQMKRY VLHLLVLSHV FSVPSLKRVC INQLETSLLS
201: PENVVDILQL ARLCDAPRLS LVCTRMIIGD FKAITQTEGW RVMRQANPSL EQELLESLVE EDTKRQERAR RLEENKVYLQ LHEAMEALIH ICRDGCRTIG
301: PRDQTLKSSQ AVCRFPACKG IELLLRHFSA CKMRVPGGCA NCKRIWQLLE LHSRMCSALE TCHVPLCRHF KEKMQHLSRK EEAKWNLLVS KVLESKATTS
401: SISERRKFPS LKT

Best Arabidopsis Sequence Match ( AT5G67480.3 )
(BLAST)

001: MVTGCVDLHQ SFKSADSSSV PIPPPLPSKS DGLKKKLGHS SVSTATRDMW DRLFNDGYKA DVVIYTDNGS IIYAHANILG TASTVIKGML KQAKRHGKWH
101: TISIRGVPHD AVRVFIRFLY SSCYEKEEMN EFIMHLLLLS HAYVVPQLKR VCEWHLEHGL LTTENVVDVF QLALLCDFPR LSLISHRMIM KHFNELSATE
201: AWTAMKKSHP FLEKEVRDSV IIEANTRKER MRKRNDQRIY SQLYEAMEAL VHICRDGCKT IGPHDKDFKP NHATCNYEAC KGLESLIRHF AGCKLRVPGG
301: CVHCKRMWQL LELHSRVCAG SDQCRVPLCR NLKEKMEKQS KKDESRWKLL VKNVLGSKKI GGSPFFLPVT NC

Arabidopsis Description

BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.