Factsheet for Zm00001d035819_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018043_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	Zm00001d018043_P001	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009478_P001	Maize	extracellular	78.81	77.27
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	51.66	41.94
Zm00001d042549_P001	Maize	nucleus	76.16	26.32
TraesCS3A01G400400.1	Wheat	cytosol	66.89	25.51
OQU88021	Sorghum	nucleus	69.54	24.71
TraesCS3B01G433400.1	Wheat	nucleus	64.9	24.5
HORVU3Hr1G090000.4	Barley	nucleus	66.23	23.36
PGSC0003DMT400013718	Potato	cytosol	39.74	22.73
Os01t0893400-01	Rice	nucleus	59.6	21.79
GSMUA_Achr6P18360_001	Banana	plastid	52.98	20.94
PGSC0003DMT400064939	Potato	nucleus	55.63	20.84
Solyc12g019420.1.1	Tomato	cytosol	34.44	20.55
AT1G05690.1	Thale cress	plastid	47.02	19.51
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	52.32	19.41
CDY10140	Canola	plastid	43.71	17.98
Solyc08g014440.2.1	Tomato	nucleus	45.03	17.94
CDX86561	Canola	nucleus	47.68	17.18
CDY15554	Canola	nucleus	47.02	16.75
Bra030621.1-P	Field mustard	endoplasmic reticulum	48.34	15.87
Zm00001d042443_P001	Maize	cytosol	35.1	15.41
Zm00001d025707_P001	Maize	cytosol	33.77	14.96
Zm00001d017101_P001	Maize	plastid	27.81	11.38

Protein Annotations

EnsemblPlants:Zm00001d035819_P001	EnsemblPlants:Zm00001d035819_T001	EnsemblPlantsGene:Zm00001d035819	Gene3D:3.30.710.10	Gene3D:3.40.718.10	InterPro:SPOP_C
PANTHER:PTHR24413	PANTHER:PTHR24413:SF140	ProteinID:AQK79733.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53659
UniParc:UPI000220B6F7	UniProt:A0A1D6LIX5	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	:	:

Description

BTB/POZ and TAZ domain-containing protein 3

Coordinates

chr6:-:52814687..52816136

Molecular Weight (calculated)

16920.8 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.024

Length

151 amino acids

Sequence
(BLAST)

001: MKEHALHLLV LSHVFSVPSL KTVCVDQLER GFLAPDNVVD MLQLARLCDA PRLALACVRM VIEDFKTISL TDGWKVMRRA NPSMEQELLE SLVEADTRRQ
101: ERAKKMEETK VYLQLYEAME VTPNLYGNLV ANTAAGIVGG MGIMPRGRDC S

Best Arabidopsis Sequence Match ( AT1G05690.1 )
(BLAST)

001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI

Arabidopsis Description

BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.