Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18000_001 | Banana | cytosol | 82.86 | 69.63 |
| GSMUA_Achr8P16990_001 | Banana | cytosol | 82.35 | 69.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 81.68 | 68.64 |
| GSMUA_Achr2P07360_001 | Banana | mitochondrion | 43.03 | 66.15 |
| PGSC0003DMT400003338 | Potato | cytosol | 81.01 | 65.76 |
| Solyc02g087900.2.1 | Tomato | cytosol | 80.67 | 65.48 |
| KRG93520 | Soybean | cytosol | 80.17 | 65.08 |
| VIT_01s0026g02230.t01 | Wine grape | cytosol | 80.0 | 64.94 |
| KRH18483 | Soybean | cytosol | 80.0 | 64.94 |
| PGSC0003DMT400016765 | Potato | cytosol | 80.0 | 64.85 |
| Solyc01g010820.2.1 | Tomato | cytosol | 79.66 | 64.58 |
| KRH45896 | Soybean | cytosol | 76.47 | 62.16 |
| VIT_14s0108g00490.t01 | Wine grape | cytosol | 81.85 | 62.12 |
| KRG99095 | Soybean | cytosol | 76.3 | 62.02 |
| AT1G69670.1 | Thale cress | cytosol | 75.29 | 61.2 |
| AT1G26830.1 | Thale cress | cytosol | 75.13 | 61.07 |
| CDY16196 | Canola | cytosol | 74.79 | 60.79 |
| CDY50732 | Canola | cytosol | 74.62 | 60.66 |
| Bra024680.1-P | Field mustard | cytosol | 74.45 | 60.52 |
| Bra016291.1-P | Field mustard | cytosol | 74.12 | 60.25 |
| CDY46437 | Canola | cytosol | 73.95 | 60.11 |
| CDY45004 | Canola | cytosol | 73.95 | 60.11 |
| KRH70713 | Soybean | cytosol | 68.24 | 55.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.14 | 30.4 |
| GSMUA_Achr7P03700_001 | Banana | cytosol | 37.65 | 30.11 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 40.0 | 29.64 |
| GSMUA_Achr1P14740_001 | Banana | cytosol | 36.64 | 29.3 |
| GSMUA_Achr1P26690_001 | Banana | cytosol | 35.29 | 28.19 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 40.0 | 27.2 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 33.11 | 26.73 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | Gene3D:1.20.58.2160 | MapMan:35.1 | ncoils:Coil |
| InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSMUA_AchrUn_randomG02180_001 | EnsemblPlants:GSMUA_AchrUn_randomP02180_001 | EnsemblPlants:GSMUA_AchrUn_randomT02180_001 |
| InterPro:IPR016158 | InterPro:IPR036388 | UniProt:M0U5N0 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF74 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 |
| SUPFAM:SSF75632 | UniParc:UPI0002954FEB | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
Cullin-3B [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02180_001]
Coordinates
chrchrUn_random:-:10091052..10093229
Molecular Weight (calculated)
69158.2 Da
IEP (calculated)
7.879
GRAVY (calculated)
-0.387
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLHKHGEKL YSGLVTTMTW HLKEISQSIE AVQGDLFLEE LNRKWGEHTK ALQMIRDILM YMDRTFITSS RKTPVYELGL NLWRDNIIRS SKIQDRQLNT
101: ILELIHKERT GEVINRGLMR NITKMLMDLG SSVYQEDFEK PFLDVSASFY SGESQQFIEC CNCGEYLKKA ERRLNEEMER VSQYLDTKTE PKITCVVEKE
201: MIANHMKQLV HMENSGLVNM LIDDRFEDLI RMYNLFQRVT EGLRLIRDLM TSHLRETGKQ LVTDPERLKD PVDFVQRLLN EKDNEEDVEI VLDKVMMLFR
301: YLQEKDIFEK YYKQHLAKRL LSGKIVSDDA ERNLIVKLKT ECGYQFTSKL EGMFTDMKTS QDTMQGFYAS QGFEAGEGPT LVVQVLTTGS WPTQPSAACN
401: LPAEILGVCD KFRAYYLGTH SGRRLTWQTN MGTADLKATF AKGQKHELNV STYQMCILML FNSVDRLSCK EIEQATAIPS QDLKRCLQSL ACVLGKNVLR
501: KVPMSKDIAE DDIFSINDKF MSKFFKIKIG TAAIIRVMKA RRVTGYNSIV MEVTKQLQPR FLPNPVMIKK RIESLIEREF LERDEDDRKL YRYLA
101: ILELIHKERT GEVINRGLMR NITKMLMDLG SSVYQEDFEK PFLDVSASFY SGESQQFIEC CNCGEYLKKA ERRLNEEMER VSQYLDTKTE PKITCVVEKE
201: MIANHMKQLV HMENSGLVNM LIDDRFEDLI RMYNLFQRVT EGLRLIRDLM TSHLRETGKQ LVTDPERLKD PVDFVQRLLN EKDNEEDVEI VLDKVMMLFR
301: YLQEKDIFEK YYKQHLAKRL LSGKIVSDDA ERNLIVKLKT ECGYQFTSKL EGMFTDMKTS QDTMQGFYAS QGFEAGEGPT LVVQVLTTGS WPTQPSAACN
401: LPAEILGVCD KFRAYYLGTH SGRRLTWQTN MGTADLKATF AKGQKHELNV STYQMCILML FNSVDRLSCK EIEQATAIPS QDLKRCLQSL ACVLGKNVLR
501: KVPMSKDIAE DDIFSINDKF MSKFFKIKIG TAAIIRVMKA RRVTGYNSIV MEVTKQLQPR FLPNPVMIKK RIESLIEREF LERDEDDRKL YRYLA
001: MSNQKKRNFQ IEAFKQRVVV DPKYADKTWK ILEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGDKLYT GLVTTMTFHL KEICKSIEEA QGGAFLELLN
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
Arabidopsis Description
CUL3BCullin-3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9L0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.