Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25976 | Sorghum | cytosol | 27.99 | 90.91 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 83.46 | 83.46 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 80.66 | 78.86 |
| PGSC0003DMT400058456 | Potato | cytosol | 75.32 | 73.09 |
| Solyc01g009060.2.1 | Tomato | cytosol | 75.32 | 73.09 |
| Os07t0167200-01 | Rice | cytosol | 77.86 | 72.17 |
| PGSC0003DMT400070468 | Potato | cytosol | 74.3 | 71.57 |
| HORVU5Hr1G104190.1 | Barley | cytosol | 73.28 | 71.29 |
| KRH73429 | Soybean | cytosol, plastid | 71.5 | 70.96 |
| Solyc11g072070.1.1 | Tomato | cytosol | 73.54 | 70.83 |
| TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 76.59 | 70.66 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 75.57 | 70.21 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 76.08 | 70.19 |
| TraesCS2B01G262200.1 | Wheat | cytosol | 75.83 | 69.95 |
| KRH14738 | Soybean | cytosol | 70.48 | 69.95 |
| Zm00001d013094_P001 | Maize | cytosol | 76.08 | 69.86 |
| EER90755 | Sorghum | cytosol | 75.83 | 69.46 |
| Zm00001d034400_P003 | Maize | cytosol | 75.32 | 69.16 |
| Zm00001d018887_P002 | Maize | cytosol | 75.32 | 68.52 |
| VIT_08s0056g01670.t01 | Wine grape | plastid | 74.05 | 67.52 |
| KXG34465 | Sorghum | cytosol | 75.57 | 67.35 |
| TraesCS5A01G429400.2 | Wheat | cytosol | 73.28 | 65.9 |
| HORVU2Hr1G055140.1 | Barley | cytosol | 76.84 | 65.8 |
| KRG94896 | Soybean | mitochondrion | 72.01 | 65.51 |
| TraesCS5B01G431400.2 | Wheat | cytosol | 72.52 | 65.22 |
| KRH06640 | Soybean | mitochondrion, plastid | 71.76 | 64.98 |
| CDX70957 | Canola | plastid | 67.18 | 64.39 |
| CDX88828 | Canola | plastid | 66.41 | 63.66 |
| Bra006591.1-P | Field mustard | plastid | 66.16 | 63.41 |
| AT5G21010.1 | Thale cress | cytosol | 66.16 | 63.41 |
| KRG88614 | Soybean | mitochondrion | 49.87 | 62.82 |
| CDY09093 | Canola | cytosol, plastid | 58.27 | 62.4 |
| KRG88616 | Soybean | cytosol | 37.15 | 62.39 |
| Bra036437.1-P | Field mustard | plastid | 70.74 | 62.33 |
| TraesCS5D01G437400.1 | Wheat | cytosol | 73.03 | 62.26 |
| AT3G43700.1 | Thale cress | plastid | 65.39 | 61.93 |
| CDY29955 | Canola | plastid | 70.48 | 61.69 |
| Bra020142.1-P | Field mustard | plastid | 64.89 | 61.45 |
| KRG94056 | Soybean | cytosol | 12.21 | 60.76 |
| KRG94057 | Soybean | mitochondrion | 28.24 | 60.66 |
| KRG94069 | Soybean | cytosol | 54.71 | 60.22 |
| KRG94050 | Soybean | mitochondrion | 57.76 | 60.05 |
| KRG94047 | Soybean | cytosol, mitochondrion, plastid | 44.27 | 59.79 |
| KRG88615 | Soybean | mitochondrion | 57.25 | 59.52 |
| KRG94064 | Soybean | mitochondrion | 56.74 | 58.99 |
| AT3G03740.1 | Thale cress | cytosol | 69.47 | 58.71 |
| KRG94052 | Soybean | cytosol | 26.97 | 56.68 |
| KRG94053 | Soybean | cytosol | 26.97 | 56.68 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 59.8 | 56.49 |
| KRH06645 | Soybean | cytosol | 56.74 | 56.31 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 59.54 | 56.12 |
| CDY71585 | Canola | cytosol | 28.5 | 55.45 |
| KRG94058 | Soybean | mitochondrion | 52.42 | 54.79 |
| GSMUA_Achr7P10650_001 | Banana | cytosol | 55.73 | 54.07 |
| CDY16586 | Canola | cytosol | 23.92 | 54.02 |
| CDY67137 | Canola | endoplasmic reticulum | 46.31 | 51.12 |
| KRH06646 | Soybean | cytosol | 37.91 | 48.85 |
| GSMUA_Achr10P... | Banana | cytosol | 22.65 | 47.09 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr7G27230_001 | EnsemblPlants:GSMUA_Achr7P27230_001 | EnsemblPlants:GSMUA_Achr7T27230_001 |
| InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | UniProt:M0TL59 | InterPro:MATH/TRAF_dom | PFAM:PF00651 |
| PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 |
| SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0002953A22 | SEG:seg |
Description
Putative Speckle-type POZ protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G27230_001]
Coordinates
chr7:-:28325796..28330756
Molecular Weight (calculated)
43227.2 Da
IEP (calculated)
5.986
GRAVY (calculated)
-0.125
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPTISRS VTETVNGSHK FVIKGYSLAK GIGVGKHIAS DTFTVGGFQW AIYFYPDGKN PEDNSAYVSV FIALASEGTD VRALFELTLV DQSGKGKHKV
101: HSHFDRSLES GPYTLKYRGS MWGYKRFFRR TALETSDYLK DDCLKINCTV GVVVSVVDSP RLHHIQVPES DFGMHFGVIL DEQEGSDVVF DVAGEKFHAH
201: KLVLAARSPI FHTQFFDGLD GESNEIIVTD MEPAVFKAIL HFIYRDTLVD DDMLATPNLP ESSISDTLVA KLLAAADRYS LGRLRLLCEA HLCREISVNS
301: VASTLALADR CHAIELKAAC LKFVAENLSA VMRSSGFEYL KDHCPSLQSE LLKIIAGCDE ECSSGGNNRS VWAELSDGED SNGRRVRPRT DTG
101: HSHFDRSLES GPYTLKYRGS MWGYKRFFRR TALETSDYLK DDCLKINCTV GVVVSVVDSP RLHHIQVPES DFGMHFGVIL DEQEGSDVVF DVAGEKFHAH
201: KLVLAARSPI FHTQFFDGLD GESNEIIVTD MEPAVFKAIL HFIYRDTLVD DDMLATPNLP ESSISDTLVA KLLAAADRYS LGRLRLLCEA HLCREISVNS
301: VASTLALADR CHAIELKAAC LKFVAENLSA VMRSSGFEYL KDHCPSLQSE LLKIIAGCDE ECSSGGNNRS VWAELSDGED SNGRRVRPRT DTG
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.