CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06640	Soybean	mitochondrion, plastid	99.54	99.08
KXG25976	Sorghum	cytosol	25.23	90.08
KRG94056	Soybean	cytosol	14.58	79.75
KRG94053	Soybean	cytosol	34.49	79.68
KRG94052	Soybean	cytosol	34.49	79.68
VIT_08s0056g01670.t01	Wine grape	plastid	76.85	77.03
KRG94050	Soybean	mitochondrion	65.28	74.6
KRG88615	Soybean	mitochondrion	65.05	74.34
KRH06645	Soybean	cytosol	67.82	73.99
KRG94069	Soybean	cytosol	61.11	73.95
KRG94064	Soybean	mitochondrion	64.35	73.55
KRG94047	Soybean	cytosol, mitochondrion, plastid	49.31	73.2
KRG88614	Soybean	mitochondrion	52.55	72.76
GSMUA_Achr7P27230_001	Banana	cytosol	65.51	72.01
GSMUA_Achr5P08970_001	Banana	cytosol	66.9	71.89
Bra036437.1-P	Field mustard	plastid	73.84	71.52
CDY29955	Canola	plastid	74.07	71.27
KRG88616	Soybean	cytosol	38.19	70.51
KRH73429	Soybean	cytosol, plastid	64.58	70.45
HORVU5Hr1G104190.1	Barley	cytosol	64.81	69.31
GSMUA_Achr4P14800_001	Banana	cytosol	62.96	69.21
KRH14738	Soybean	cytosol	63.43	69.19
Os07t0167200-01	Rice	cytosol	67.59	68.87
TraesCS2D01G246900.1	Wheat	cytosol, plastid	66.9	67.84
TraesCS2B01G262200.1	Wheat	cytosol	66.9	67.84
TraesCS2A01G237800.1	Wheat	cytosol	66.9	67.84
AT3G03740.1	Thale cress	cytosol	72.69	67.53
KRG94058	Soybean	mitochondrion	58.56	67.29
EER90755	Sorghum	cytosol	65.74	66.2
Zm00001d013094_P001	Maize	cytosol	65.51	66.12
Zm00001d034400_P003	Maize	cytosol	65.51	66.12
KRH06646	Soybean	cytosol	46.53	65.9
KXG34465	Sorghum	cytosol	66.9	65.53
Zm00001d018887_P002	Maize	cytosol	65.51	65.51
KRG94057	Soybean	mitochondrion	27.55	65.03
TraesCS5B01G431400.2	Wheat	cytosol	65.28	64.53
TraesCS5A01G429400.2	Wheat	cytosol	65.05	64.3
HORVU2Hr1G055140.1	Barley	cytosol	66.9	62.96
CDY67137	Canola	endoplasmic reticulum	51.85	62.92
TraesCS5D01G437400.1	Wheat	cytosol	65.05	60.95
KRG95474	Soybean	plastid	54.86	57.8
KRH67156	Soybean	plastid	54.17	57.07
KRH71465	Soybean	plastid	54.17	56.8
KRH31976	Soybean	plastid	53.94	56.42
KRH31032	Soybean	nucleus	51.85	53.98
KRG97837	Soybean	cytosol	51.62	53.86

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100809683	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02012053
InterPro:BPM_C	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_19G116300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
UniProt:I1N8D1	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KRG94896	ProteinID:KRG94896
ProteinID:KRG94896.1	ProteinID:KRG94897.1	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000233E312	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:37167723..37172388

Molecular Weight (calculated)

47815.2 Da

IEP (calculated)

5.119

GRAVY (calculated)

-0.259

Length

432 amino acids

Sequence
(BLAST)

001: MHTASRSNGG GVLASRTSSR SVTETVNGSH KFVIKGYSLA KGIGVGKHIA SETFTVGGYQ WAIYFYPDGK NPEDNSAYVS VFIALASEGT DVRALFELTL
101: LDQSGNGKHK VHSHFDRSLE SGPYTLKYRG SMWGYKRFFK RAQLEASTFL KDDCLKINCT VGVVVSSIDC SKLNTIQVPE SDIGAHFGML LENEEGSDVT
201: FSVGGERFHA HKLVLAARST AFETEFFNGM EEDDHDIVVT DMEPKVFKAL LHFIYRDTLI DDEELFMSRS SFLPSVSESF AAKLLAAAEK YGLPRLKLMC
301: ESVLCKDISI DSVAYILALA DRYRATELKS VCLQFSAENL VAVMQSDGFE YLKENCPLLQ SELLKTVAGC EEEFSGEGKC RSVWAQFSDG GDTNDRSVRQ
401: QTWENGVERS QSLWVHLSDG VNNNDRSPGQ EA

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.