Factsheet for AT3G03740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036437.1-P	Field mustard	plastid	87.96	91.7
CDY29955	Canola	plastid	88.17	91.31
KXG25976	Sorghum	cytosol	22.15	85.12
CDY67137	Canola	endoplasmic reticulum	64.3	83.99
KRG94896	Soybean	mitochondrion	67.53	72.69
KRG94056	Soybean	cytosol	12.26	72.15
KRH06640	Soybean	mitochondrion, plastid	67.31	72.12
GSMUA_Achr5P08970_001	Banana	cytosol	61.08	70.65
VIT_08s0056g01670.t01	Wine grape	plastid	65.16	70.3
GSMUA_Achr7P27230_001	Banana	cytosol	58.71	69.47
HORVU5Hr1G104190.1	Barley	cytosol	59.78	68.81
GSMUA_Achr4P14800_001	Banana	cytosol	58.06	68.7
Os07t0167200-01	Rice	cytosol	61.08	66.98
Zm00001d013094_P001	Maize	cytosol	61.08	66.36
EER90755	Sorghum	cytosol	61.08	66.2
TraesCS2B01G262200.1	Wheat	cytosol	60.65	66.2
TraesCS2D01G246900.1	Wheat	cytosol, plastid	60.65	66.2
Zm00001d034400_P003	Maize	cytosol	60.86	66.12
TraesCS2A01G237800.1	Wheat	cytosol	60.43	65.96
AT5G21010.1	Thale cress	cytosol	57.42	65.12
TraesCS5A01G429400.2	Wheat	cytosol	60.22	64.07
Zm00001d018887_P002	Maize	cytosol	59.35	63.89
TraesCS5B01G431400.2	Wheat	cytosol	60.0	63.84
KXG34465	Sorghum	cytosol	60.43	63.72
AT3G43700.1	Thale cress	plastid	56.13	62.89
KRH06645	Soybean	cytosol	53.55	62.88
KRG88614	Soybean	mitochondrion	42.15	62.82
KRG94050	Soybean	mitochondrion	50.97	62.7
KRG94052	Soybean	cytosol	25.16	62.57
KRG94053	Soybean	cytosol	25.16	62.57
HORVU2Hr1G055140.1	Barley	cytosol	61.51	62.31
KRG88615	Soybean	mitochondrion	50.54	62.17
KRG94047	Soybean	cytosol, mitochondrion, plastid	38.71	61.86
KRG94057	Soybean	mitochondrion	24.3	61.75
KRG94069	Soybean	cytosol	47.31	61.62
KRG88616	Soybean	cytosol	30.97	61.54
KRG94064	Soybean	mitochondrion	49.89	61.38
TraesCS5D01G437400.1	Wheat	cytosol	60.22	60.74
KRG94058	Soybean	mitochondrion	45.59	56.38
AT3G06190.1	Thale cress	cytosol	46.67	53.45
AT2G39760.1	Thale cress	cytosol	45.59	51.96
KRH06646	Soybean	cytosol	32.9	50.16
AT5G19000.2	Thale cress	plastid	46.67	49.09

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:821170	ProteinID:AAF00643.1
ProteinID:AEE73980.1	EMBL:AF367309	ArrayExpress:AT3G03740	EnsemblPlantsGene:AT3G03740	RefSeq:AT3G03740	TAIR:AT3G03740
RefSeq:AT3G03740-TAIR-G	EnsemblPlants:AT3G03740.1	TAIR:AT3G03740.1	Symbol:ATBPM4	EMBL:AY059150	EMBL:AY084246
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950
GO:GO:0006970	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009628
GO:GO:0009987	GO:GO:0009991	GO:GO:0016567	GO:GO:0019538	GO:GO:0042631	GO:GO:0071472
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	RefSeq:NP_566212.2	PFAM:PF00651
PO:PO:0000013	PO:PO:0000014	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	UniProt:Q9SRV1	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00000A6915	SEG:seg	:

Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]

Coordinates

chr3:-:936878..941670

Molecular Weight (calculated)

51000.7 Da

IEP (calculated)

4.978

GRAVY (calculated)

-0.369

Length

465 amino acids

Sequence
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.