Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G064920.1 | |
| HORVU6Hr1G075720.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G43700.1 | HORVU6Hr1G075720.2 | AT1G26830.1 | 15772280 |
| AT3G43700.1 | HORVU2Hr1G064920.1 | AT2G39760.1 | 15618422 |
| AT5G21010.1 | HORVU2Hr1G064920.1 | AT2G39760.1 | 15618422 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G429400.2 | Wheat | cytosol | 99.5 | 91.99 |
| TraesCS5B01G431400.2 | Wheat | cytosol | 98.76 | 91.3 |
| TraesCS5D01G437400.1 | Wheat | cytosol | 99.01 | 86.77 |
| EER90755 | Sorghum | cytosol | 87.13 | 82.05 |
| Zm00001d034400_P003 | Maize | cytosol | 86.88 | 82.01 |
| Zm00001d013094_P001 | Maize | cytosol | 86.39 | 81.54 |
| HORVU2Hr1G055140.1 | Barley | cytosol | 83.66 | 73.64 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 71.29 | 73.28 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 72.52 | 72.89 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 70.3 | 72.26 |
| Solyc01g009060.2.1 | Tomato | cytosol | 70.79 | 70.62 |
| PGSC0003DMT400070468 | Potato | cytosol | 71.29 | 70.59 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 73.76 | 70.45 |
| PGSC0003DMT400058456 | Potato | cytosol | 70.54 | 70.37 |
| Solyc11g072070.1.1 | Tomato | cytosol | 70.79 | 70.1 |
| KRH14738 | Soybean | cytosol | 67.82 | 69.19 |
| KRH73429 | Soybean | cytosol, plastid | 67.57 | 68.94 |
| VIT_08s0056g01670.t01 | Wine grape | plastid | 70.79 | 66.36 |
| CDX88828 | Canola | plastid | 67.33 | 66.34 |
| Bra006591.1-P | Field mustard | plastid | 67.33 | 66.34 |
| CDX70957 | Canola | plastid | 67.08 | 66.1 |
| AT5G21010.1 | Thale cress | cytosol | 66.34 | 65.37 |
| KRG94896 | Soybean | mitochondrion | 69.31 | 64.81 |
| KRH06640 | Soybean | mitochondrion, plastid | 69.06 | 64.29 |
| AT3G43700.1 | Thale cress | plastid | 65.84 | 64.1 |
| Bra020142.1-P | Field mustard | plastid | 65.84 | 64.1 |
| CDY09093 | Canola | cytosol, plastid | 57.92 | 63.76 |
| KRG94056 | Soybean | cytosol | 12.38 | 63.29 |
| Bra036437.1-P | Field mustard | plastid | 69.06 | 62.56 |
| CDY29955 | Canola | plastid | 68.56 | 61.69 |
| KRG88614 | Soybean | mitochondrion | 47.52 | 61.54 |
| KRG88616 | Soybean | cytosol | 35.15 | 60.68 |
| KRG94057 | Soybean | mitochondrion | 27.48 | 60.66 |
| AT3G03740.1 | Thale cress | cytosol | 68.81 | 59.78 |
| KRG94069 | Soybean | cytosol | 52.23 | 59.1 |
| KRG94050 | Soybean | mitochondrion | 55.2 | 58.99 |
| CDY71585 | Canola | cytosol | 29.46 | 58.91 |
| KRG88615 | Soybean | mitochondrion | 54.7 | 58.47 |
| KRG94047 | Soybean | cytosol, mitochondrion, plastid | 42.08 | 58.42 |
| KRG94064 | Soybean | mitochondrion | 53.96 | 57.67 |
| CDY16586 | Canola | cytosol | 24.75 | 57.47 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 55.2 | 56.89 |
| KRH06645 | Soybean | cytosol | 55.45 | 56.57 |
| KRG94052 | Soybean | cytosol | 25.99 | 56.15 |
| KRG94053 | Soybean | cytosol | 25.99 | 56.15 |
| KRG94058 | Soybean | mitochondrion | 50.25 | 53.99 |
| CDY67137 | Canola | endoplasmic reticulum | 46.53 | 52.81 |
| HORVU2Hr1G064920.1 | Barley | plastid | 52.48 | 49.3 |
| KRH06646 | Soybean | cytosol | 35.64 | 47.21 |
| HORVU1Hr1G020270.1 | Barley | mitochondrion, plastid | 34.65 | 40.11 |
| HORVU5Hr1G009850.1 | Barley | cytosol | 34.65 | 40.0 |
| HORVU0Hr1G010120.1 | Barley | plastid | 34.16 | 39.09 |
| HORVU2Hr1G112920.1 | Barley | cytosol | 33.91 | 39.03 |
| HORVU5Hr1G108760.1 | Barley | cytosol | 32.43 | 38.42 |
| HORVU3Hr1G084920.2 | Barley | cytosol | 25.0 | 38.11 |
| HORVU5Hr1G089030.1 | Barley | cytosol | 32.92 | 37.46 |
| HORVU2Hr1G106560.1 | Barley | plastid | 32.18 | 36.41 |
| HORVU7Hr1G114550.1 | Barley | cytosol, plastid | 33.17 | 36.02 |
| HORVU5Hr1G108800.1 | Barley | cytosol | 29.21 | 34.6 |
| HORVU7Hr1G074420.1 | Barley | cytosol | 24.75 | 34.36 |
| HORVU7Hr1G074430.1 | Barley | cytosol | 29.95 | 33.89 |
| HORVU5Hr1G110530.1 | Barley | cytosol | 20.54 | 33.47 |
| HORVU6Hr1G034020.1 | Barley | plastid | 20.05 | 31.64 |
| HORVU5Hr1G009860.1 | Barley | cytosol, peroxisome | 33.91 | 31.07 |
| HORVU2Hr1G106750.2 | Barley | plastid | 35.15 | 29.96 |
| HORVU6Hr1G069480.1 | Barley | plastid | 32.67 | 27.79 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A287SK66 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU5Hr1G104190 | EnsemblPlants:HORVU5Hr1G104190.1 |
| InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 |
| PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 |
| SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI000B46DE6F | : | : |
Description
No Description!
Coordinates
chrchr5H:+:618533727..618536569
Molecular Weight (calculated)
44470.1 Da
IEP (calculated)
5.312
GRAVY (calculated)
-0.304
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: PARDAAAASP TSSRSVTETV NGSHRFVIQG YSLAKGMGVG KHIASETFAV GGYQWAIYFY PDGKNPEDNS AYVSVFIALA SEGTDVRALF ELTLQDQSGR
101: GKHKVHSHFD RALDAGPYTL KYRGSMWGYK RFFRRTALET SDFLKDDCLK INCTVGVVTS SMEYSRPHSL EVPDSDIGYH FGTLLDSQEG ADVIFSVAGE
201: KFHAHKLVLA ARSSFFRSEF LDPESDEENS EVDTSNEIKE IVIDDMEPKV FQAVLHFMYR DNLVGDDELS PSSSDCPIFD TLAGKLLAAA DKYELPRLRV
301: LCESYLCKQI SVKSVATTLA LADRHHATEL KSVCLKFAAE NLSAVIRTDG FDYLKDNCPA LQSEILRTVA GCEEECSSGG KSQSVWGQIS DGGDTSGRRV
401: RPRV
101: GKHKVHSHFD RALDAGPYTL KYRGSMWGYK RFFRRTALET SDFLKDDCLK INCTVGVVTS SMEYSRPHSL EVPDSDIGYH FGTLLDSQEG ADVIFSVAGE
201: KFHAHKLVLA ARSSFFRSEF LDPESDEENS EVDTSNEIKE IVIDDMEPKV FQAVLHFMYR DNLVGDDELS PSSSDCPIFD TLAGKLLAAA DKYELPRLRV
301: LCESYLCKQI SVKSVATTLA LADRHHATEL KSVCLKFAAE NLSAVIRTDG FDYLKDNCPA LQSEILRTVA GCEEECSSGG KSQSVWGQIS DGGDTSGRRV
401: RPRV
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.