Factsheet for HORVU2Hr1G106750.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G084920.2	Barley	cytosol	55.91	100.0
TraesCS2D01G472400.1	Wheat	cytosol	71.94	93.68
TraesCS2B01G495400.1	Wheat	cytosol	71.73	93.41
TraesCS2A01G472700.1	Wheat	cytosol	71.1	92.58
Os04t0625600-01	Rice	cytosol	58.86	71.54
KXG27151	Sorghum	plastid	55.7	68.39
HORVU2Hr1G106560.1	Barley	plastid	40.93	54.34
HORVU5Hr1G089030.1	Barley	cytosol	37.76	50.42
HORVU5Hr1G108760.1	Barley	cytosol	30.17	41.94
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	29.11	39.54
HORVU5Hr1G110530.1	Barley	cytosol	20.04	38.31
HORVU0Hr1G010120.1	Barley	plastid	28.48	38.24
HORVU7Hr1G114550.1	Barley	cytosol, plastid	29.96	38.17
HORVU5Hr1G108800.1	Barley	cytosol	27.43	38.12
HORVU2Hr1G023850.1	Barley	cytosol, plastid	31.22	37.76
HORVU5Hr1G009850.1	Barley	cytosol	27.85	37.71
HORVU6Hr1G034020.1	Barley	plastid	19.83	36.72
HORVU2Hr1G112920.1	Barley	cytosol	26.37	35.61
HORVU5Hr1G104190.1	Barley	cytosol	29.96	35.15
HORVU7Hr1G074420.1	Barley	cytosol	21.52	35.05
HORVU7Hr1G074430.1	Barley	cytosol	25.74	34.17
HORVU2Hr1G064920.1	Barley	plastid	30.17	33.26
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	29.32	31.52
HORVU2Hr1G055140.1	Barley	cytosol	30.17	31.15
HORVU6Hr1G069480.1	Barley	plastid	30.17	30.11

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287JC54	InterPro:BPM_C
InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G106750
EnsemblPlants:HORVU2Hr1G106750.2	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B482C39
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:710199618..710201231

Molecular Weight (calculated)

46773.2 Da

IEP (calculated)

7.635

GRAVY (calculated)

-0.112

Length

474 amino acids

Sequence
(BLAST)

001: GAGVSSRLEQ PISVRFPGFS SAPPSPPPPA AATFISSATA GRARRGRSDA QLPVRRGRGP LLPRIFPPLP VXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXP GHCLPKTSSM SVTDSVTAAH DFRVTGYSLL DGMGVGRFVS SSTFTVGGLD WAVRFYPDGS TANCIGNASA FLYYCSRDKD
201: VRARFTLNLM EKDGRLSQVT NSYMKHTFSP ASDNWGFIKF IEKSKIQGSP FLDNDCLTIR CLITVAKESR TQDVETNSIL VPPSNLHQDF GNMLRDGEGA
301: DVTFTVCGQL FPAHRCVLAF RSPVFRAELF GPLREDATEC IKIDDMEPMI FEALLHFIYT DTLPDNCKDG KAAAMQHMLV AADRYGVDRL RLLCERKLSE
401: AIDVETVATT LALAEQHHCS QLRGACVRFM ASPDMLGPVM LTDGFKHLVA SCPLILKDVL DEVSRIWRDK PSEK

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.