Factsheet for HORVU2Hr1G112920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G508000.1	Wheat	cytosol	35.04	87.86
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	79.49	80.4
HORVU0Hr1G010120.1	Barley	plastid	75.78	75.35
HORVU5Hr1G009850.1	Barley	cytosol	74.07	74.29
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	72.93	58.05
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	51.85	52.15
HORVU7Hr1G114550.1	Barley	cytosol, plastid	49.0	46.24
HORVU5Hr1G108760.1	Barley	cytosol	43.02	44.28
HORVU5Hr1G110530.1	Barley	cytosol	30.2	42.74
HORVU7Hr1G074430.1	Barley	cytosol	40.17	39.5
HORVU5Hr1G108800.1	Barley	cytosol	38.18	39.3
HORVU6Hr1G034020.1	Barley	plastid	28.49	39.06
HORVU7Hr1G074420.1	Barley	cytosol	32.19	38.83
HORVU3Hr1G084920.2	Barley	cytosol	28.21	37.36
HORVU5Hr1G089030.1	Barley	cytosol	36.18	35.77
HORVU6Hr1G069480.1	Barley	plastid	47.58	35.16
HORVU2Hr1G106560.1	Barley	plastid	35.33	34.73
HORVU2Hr1G023850.1	Barley	cytosol, plastid	38.75	34.69
HORVU5Hr1G104190.1	Barley	cytosol	39.03	33.91
HORVU2Hr1G064920.1	Barley	plastid	36.18	29.53
HORVU2Hr1G055140.1	Barley	cytosol	37.89	28.98
HORVU2Hr1G106750.2	Barley	plastid	35.61	26.37

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287JH16	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G112920	EnsemblPlants:HORVU2Hr1G112920.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B47D63A	:	:

Description

No Description!

Coordinates

chrchr2H:-:727086408..727113159

Molecular Weight (calculated)

39281.5 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.093

Length

351 amino acids

Sequence
(BLAST)

001: MAEQQSSIAR VPSRCTAETA RAMVAFEIAG YSLHKGLGRG KYLCSPAFFV GGYEWYIWYY PDGNDEESEG YISVFLKLPT KNAEARALCK WKVVDQNKGV
101: SIVVHSGKEP QLFHRQKSTW GIPKFMKTTA EIAEYLYLQN DCLVIECEVS VIKGAIEVHV PPSDLLDNLA TLLEGKKGAD VTFKVQGEVF PAHKNLLAVR
201: SAVFDAEFYG PMADKGAHDI TIDDMEPAVF KAFLHFIYTD SMPSMDDLDG DDRREMVKHL LVAADKYAMG RMKMICEGML CKCLGIETVA TILALADQHH
301: CSNLKDACIE FMLSSNRMDD VIASQGYAHL KRSFPGLFVE LFERTVKSRK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.