Factsheet for HORVU6Hr1G069480.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G275800.1	Wheat	cytosol	68.21	87.1
TraesCS6B01G303100.1	Wheat	cytosol	66.53	87.05
TraesCS6D01G256000.1	Wheat	cytosol	68.84	84.94
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	38.11	51.86
HORVU5Hr1G110530.1	Barley	cytosol	26.11	50.0
HORVU5Hr1G108760.1	Barley	cytosol	35.16	48.97
HORVU0Hr1G010120.1	Barley	plastid	36.21	48.73
HORVU5Hr1G009850.1	Barley	cytosol	35.79	48.57
HORVU2Hr1G112920.1	Barley	cytosol	35.16	47.58
HORVU7Hr1G114550.1	Barley	cytosol, plastid	36.21	46.24
HORVU5Hr1G108800.1	Barley	cytosol	31.37	43.7
HORVU7Hr1G074420.1	Barley	cytosol	26.53	43.3
HORVU7Hr1G074430.1	Barley	cytosol	31.37	41.74
HORVU3Hr1G084920.2	Barley	cytosol	22.74	40.75
HORVU2Hr1G106560.1	Barley	plastid	29.05	38.66
HORVU5Hr1G089030.1	Barley	cytosol	28.21	37.75
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	34.74	37.41
HORVU6Hr1G034020.1	Barley	plastid	19.58	36.33
HORVU2Hr1G023850.1	Barley	cytosol, plastid	29.05	35.2
HORVU5Hr1G104190.1	Barley	cytosol	27.79	32.67
HORVU2Hr1G055140.1	Barley	cytosol	29.68	30.72
HORVU2Hr1G106750.2	Barley	plastid	30.11	30.17
HORVU2Hr1G064920.1	Barley	plastid	26.11	28.84

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287UKD9	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G069480	EnsemblPlants:HORVU6Hr1G069480.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B4708D2	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:482169906..482172190

Molecular Weight (calculated)

53509.4 Da

IEP (calculated)

9.566

GRAVY (calculated)

-0.436

Length

475 amino acids

Sequence
(BLAST)

001: LARISSVHTP HPIQRKKKHS TPTNATVTGS YRRAHASETR KPKCPTLADR IASSHACGLR RRSAVRRVTY SPSPRLISAA SATDRRPRVQ GSRRSPSPTP
101: RTTYKSCRME SASKETASRC TKEKVTASRC TTDKEKGAHI FEIAGYSLKK DMGVDKFVRS TIFTVGGYDW SIRFYPKGTY ESPEGCMVIC LELMSSNAEV
201: RTFFQLGLVK HETGLVGSMF SQNNKVFSFK TRNNRQYHLF ILTSSLETKP VKYLHNDLLK IRCDMTVIKE SEVYETVGHS EIEVPPSDIM EHLAKLLDSE
301: EEADVTFNVG GETFQAHKIF LAMRSPVFKA ELFGPMKEKK MRRLTVKDIQ PAVFKALLHF IYTDSLPDFD DLEGDDNCEM IRHLLVAADK YAMDRLKLMC
401: QNILGKSLDV ENVATTLALA DQHNCDKLKD VCIEFIASSD KMDDVVASKG YANLKRSCPS VLIDALEKRS RPRIS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.