Factsheet for TraesCS6A01G275800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G303100.1	Wheat	cytosol	94.35	96.69
TraesCS6D01G256000.1	Wheat	cytosol	97.85	94.55
HORVU6Hr1G069480.1	Barley	plastid	87.1	68.21
TraesCS5A01G452100.1	Wheat	cytosol	22.85	65.38
TraesCS2A01G508000.1	Wheat	cytosol	22.58	60.0
TraesCS5A01G462000.1	Wheat	cytosol	28.23	60.0
TraesCS5A01G040900.1	Wheat	cytosol	35.48	58.67
TraesCS4A01G193000.1	Wheat	cytosol	54.03	55.52
TraesCS2A01G458700.1	Wheat	cytosol	20.97	53.42
TraesCS3A01G164400.1	Wheat	cytosol	35.22	53.04
TraesCS7A01G311400.1	Wheat	cytosol	25.81	52.75
TraesCS7A01G511200.1	Wheat	cytosol	21.77	52.26
TraesCS4A01G462500.1	Wheat	mitochondrion	49.73	51.97
TraesCS2A01G458500.1	Wheat	cytosol	18.55	51.88
TraesCS2A01G543300.1	Wheat	cytosol	45.43	50.45
TraesCS5A01G040800.1	Wheat	cytosol	47.31	50.43
TraesCS5A01G451900.1	Wheat	cytosol	48.66	50.42
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	47.04	50.29
TraesCS7A01G026200.1	Wheat	mitochondrion	43.28	49.54
TraesCS5A01G451500.1	Wheat	cytosol	47.85	49.04
TraesCS2A01G366500.1	Wheat	cytosol	47.04	48.88
TraesCS5A01G041400.1	Wheat	plastid	46.24	48.86
TraesCS3A01G019700.1	Wheat	cytosol	47.31	48.62
TraesCS5A01G041300.1	Wheat	cytosol	45.16	47.73
TraesCS7A01G511400.1	Wheat	cytosol	46.51	47.66
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	44.62	47.29
TraesCS5A01G451600.1	Wheat	cytosol	44.09	46.99
TraesCS5A01G461800.1	Wheat	cytosol	42.47	46.75
TraesCS3A01G212400.1	Wheat	cytosol	43.01	46.51
TraesCS2A01G217100.1	Wheat	cytosol	44.89	46.39
TraesCS3A01G320300.1	Wheat	cytosol	44.09	46.2
TraesCS3A01G020800.1	Wheat	cytosol	44.09	46.07
TraesCS3A01G020200.1	Wheat	cytosol	44.09	45.81
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	30.38	45.75
TraesCS1A01G368600.1	Wheat	mitochondrion	42.47	45.4
TraesCS2A01G418000.1	Wheat	cytosol	43.82	44.41
TraesCS2A01G418100.1	Wheat	cytosol	43.82	44.29
TraesCS2A01G470900.1	Wheat	cytosol	42.47	43.89
TraesCS5A01G528500.1	Wheat	cytosol	37.1	43.53
TraesCS2A01G472600.1	Wheat	cytosol	38.71	42.35
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	45.43	41.83
TraesCS5A01G528600.1	Wheat	cytosol	39.78	41.57
TraesCS4A01G465200.1	Wheat	cytosol	37.37	41.25
TraesCS7A01G511500.1	Wheat	cytosol	40.59	41.03
TraesCS4A01G465700.1	Wheat	cytosol	39.25	40.78
TraesCS2A01G471000.1	Wheat	cytosol	25.81	40.34
TraesCS2A01G472700.1	Wheat	cytosol	38.44	39.29
TraesCS5A01G554900.1	Wheat	cytosol	37.9	39.28
TraesCS2A01G470700.1	Wheat	cytosol, plastid	38.71	38.81
TraesCS2A01G470400.1	Wheat	cytosol	37.63	38.78
TraesCS2A01G473400.1	Wheat	cytosol	32.8	38.73
TraesCS7A01G550800.1	Wheat	cytosol	28.23	38.6
TraesCS2A01G470000.1	Wheat	plastid	36.56	38.1
TraesCS2A01G473300.1	Wheat	cytosol	30.11	37.84
TraesCS6A01G167500.1	Wheat	plastid	33.87	37.72
TraesCS2A01G473500.1	Wheat	cytosol	35.22	37.43
TraesCS5A01G361900.1	Wheat	cytosol	35.75	37.05
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	38.44	33.65
TraesCS2A01G543600.1	Wheat	plastid	24.19	33.58
TraesCS2A01G255800.1	Wheat	cytosol	34.41	32.32
TraesCS2A01G237800.1	Wheat	cytosol	36.29	31.69
TraesCS2A01G471800.1	Wheat	mitochondrion	37.63	30.97
TraesCS5A01G429400.2	Wheat	cytosol	36.29	30.89
TraesCS2A01G471700.1	Wheat	cytosol	31.18	27.68

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS6A01G275800
EnsemblPlants:TraesCS6A01G275800.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr6A:+:502366179..502367297

Molecular Weight (calculated)

41962.0 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.192

Length

372 amino acids

Sequence
(BLAST)

001: MVVDRMESAS KEMALRCTTE KVTASRCSTH KEEGTHIFEI AGYSLKKDMG VGKFVRSVTF TVGGYDWSIR FYPEGTTESP EGCMGICLEL MSSNAEVRTF
101: FRLGLVKHET GLIGSMFTPN NKVFSSKTRN SREYHLFILR SSLEAKPLKY LRDDFLVIKC NITVIKESEV YETMGHSEIE VPPSDIMEHL AKLLDTKEEA
201: DVTFSVGGET FQAHKILLAM RSPVFKAELF GPMKEKRMRC LTIKDMQPAV FKALLHFIYT DSLPDLDDLE GDDKCEMIRH LLVAADKYAM DRLKIMCQNI
301: LGKSLDVENV ATTLALADQH NCDKLKDICI EFIASSDKMD DVVATKGYAN LKRSCPSVLI DALEKRSRPR IA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.