Factsheet for TraesCS6A01G167500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G156500.1	Wheat	plastid	97.6	97.6
HORVU6Hr1G034020.1	Barley	plastid	69.76	91.02
TraesCS5A01G461800.1	Wheat	cytosol	41.92	41.42
TraesCS2A01G543300.1	Wheat	cytosol	41.32	41.19
TraesCS5A01G462000.1	Wheat	cytosol	21.56	41.14
TraesCS5A01G451500.1	Wheat	cytosol	44.31	40.77
TraesCS2A01G458500.1	Wheat	cytosol	15.87	39.85
TraesCS5A01G451600.1	Wheat	cytosol	41.32	39.54
OQU80118	Sorghum	cytosol	14.37	39.34
TraesCS5A01G451900.1	Wheat	cytosol	42.22	39.28
TraesCS3A01G164400.1	Wheat	cytosol	28.74	38.87
TraesCS7A01G026200.1	Wheat	mitochondrion	37.43	38.46
TraesCS3A01G019700.1	Wheat	cytosol	41.62	38.4
TraesCS3A01G020200.1	Wheat	cytosol	41.02	38.27
TraesCS5A01G452100.1	Wheat	cytosol	14.67	37.69
TraesCS2A01G418000.1	Wheat	cytosol	41.32	37.6
TraesCS4A01G462500.1	Wheat	mitochondrion	39.82	37.36
TraesCS2A01G418100.1	Wheat	cytosol	40.42	36.68
TraesCS3A01G020800.1	Wheat	cytosol	38.62	36.24
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	37.72	36.21
TraesCS2A01G508000.1	Wheat	cytosol	14.97	35.71
TraesCS2A01G458700.1	Wheat	cytosol	15.57	35.62
TraesCS2A01G366500.1	Wheat	cytosol	38.02	35.47
TraesCS4A01G193000.1	Wheat	cytosol	38.32	35.36
TraesCS5A01G041400.1	Wheat	plastid	37.13	35.23
TraesCS3A01G212400.1	Wheat	cytosol	35.93	34.88
TraesCS5A01G040800.1	Wheat	cytosol	36.23	34.67
TraesCS5A01G040900.1	Wheat	cytosol	23.35	34.67
TraesCS5A01G041300.1	Wheat	cytosol	36.53	34.66
Zm00001d024349_P001	Maize	cytosol	36.53	33.98
TraesCS2A01G217100.1	Wheat	cytosol	36.53	33.89
TraesCS6A01G275800.1	Wheat	cytosol	37.72	33.87
TraesCS2A01G472600.1	Wheat	cytosol	34.43	33.82
TraesCS3A01G320300.1	Wheat	cytosol	35.93	33.8
TraesCS2A01G471000.1	Wheat	cytosol	23.95	33.61
TraesCS7A01G311400.1	Wheat	cytosol	18.26	33.52
TraesCS2A01G473500.1	Wheat	cytosol	35.03	33.43
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	35.03	33.33
TraesCS5A01G528600.1	Wheat	cytosol	35.03	32.87
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	39.52	32.67
TraesCS7A01G511400.1	Wheat	cytosol	35.33	32.51
TraesCS5A01G528500.1	Wheat	cytosol	30.84	32.49
TraesCS1A01G368600.1	Wheat	mitochondrion	33.83	32.47
TraesCS4A01G465700.1	Wheat	cytosol	34.73	32.4
TraesCS2A01G473400.1	Wheat	cytosol	30.54	32.38
TraesCS7A01G511200.1	Wheat	cytosol	14.97	32.26
TraesCS4A01G465200.1	Wheat	cytosol	32.34	32.05
TraesCS7A01G550800.1	Wheat	cytosol	26.05	31.99
TraesCS2A01G472700.1	Wheat	cytosol	34.73	31.87
TraesCS2A01G543600.1	Wheat	plastid	25.45	31.72
TraesCS2A01G470900.1	Wheat	cytosol	34.13	31.67
TraesCS7A01G511500.1	Wheat	cytosol	34.73	31.52
TraesCS2A01G473300.1	Wheat	cytosol	27.84	31.42
TraesCS5A01G554900.1	Wheat	cytosol	33.23	30.92
TraesCS2A01G470400.1	Wheat	cytosol	33.23	30.75
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	22.16	29.96
TraesCS5A01G361900.1	Wheat	cytosol	31.74	29.53
TraesCS2A01G470700.1	Wheat	cytosol, plastid	32.63	29.38
TraesCS2A01G255800.1	Wheat	cytosol	33.23	28.03
TraesCS2A01G470000.1	Wheat	plastid	29.94	28.01
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	35.63	28.0
TraesCS2A01G471700.1	Wheat	cytosol	33.53	26.73
TraesCS5A01G429400.2	Wheat	cytosol	32.93	25.17
TraesCS2A01G237800.1	Wheat	cytosol	31.74	24.88
TraesCS2A01G471800.1	Wheat	mitochondrion	31.74	23.45

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR44756	PANTHER:PTHR44756:SF1
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS6A01G167500
EnsemblPlants:TraesCS6A01G167500.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:-:171794535..171796030

Molecular Weight (calculated)

36413.9 Da

IEP (calculated)

8.793

GRAVY (calculated)

0.004

Length

334 amino acids

Sequence
(BLAST)

001: MPASSAKAVL ETAASTSTCT PETVQRKHVF DIRGYSQHKL LGPNVYISSG AFAVGGFDWN IRYYPGGYLK PKYVSVYLEL LSAGARVRAS CDLTVVGQRP
101: GSPSLVSRTP PMLFTSDLSR FAPSTSKFVK RSKLESPSWG LVHGDRLVIE CVVTVFMYPT VVTRAAAPDV GYPPSDLHRD LARMYESQAG ADVGFLVGGQ
201: GFRAHRTVLA MRAPAFMAGV VRGGGLGFSG GCVDINDMQP EAFDALLYYI YMDSLPAAIR DVDGDRKREL VMDLLAAADR YDIQRLKLIC ETALSKTLEA
301: NTVVTTLTLA EKHHCQRLRQ ACVQFIASSV DQIK

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.