Factsheet for TraesCS3A01G020800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G020200.1	Wheat	cytosol	81.74	81.28
TraesCS3A01G019700.1	Wheat	cytosol	76.97	75.69
TraesCS3D01G026500.1	Wheat	mitochondrion	81.74	75.58
TraesCS3B01G025700.1	Wheat	cytosol	81.46	74.94
TraesCS5A01G040900.1	Wheat	cytosol	39.61	62.67
TraesCS2A01G508000.1	Wheat	cytosol	24.16	61.43
TraesCS5A01G452100.1	Wheat	cytosol	20.51	56.15
TraesCS5A01G462000.1	Wheat	cytosol	26.97	54.86
TraesCS7A01G511200.1	Wheat	cytosol	23.88	54.84
TraesCS5A01G041400.1	Wheat	plastid	53.37	53.98
TraesCS5A01G040800.1	Wheat	cytosol	51.97	53.01
TraesCS5A01G041300.1	Wheat	cytosol	51.69	52.27
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	50.84	52.01
TraesCS4A01G462500.1	Wheat	mitochondrion	51.12	51.12
TraesCS2A01G366500.1	Wheat	cytosol	51.4	51.12
TraesCS7A01G026200.1	Wheat	mitochondrion	46.63	51.08
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	50.0	50.71
TraesCS3A01G320300.1	Wheat	cytosol	50.0	50.14
TraesCS3A01G164400.1	Wheat	cytosol	34.27	49.39
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	33.99	48.99
TraesCS2A01G543300.1	Wheat	cytosol	46.07	48.96
TraesCS7A01G311400.1	Wheat	cytosol	24.72	48.35
TraesCS7A01G511400.1	Wheat	cytosol	48.03	47.11
TraesCS2A01G458500.1	Wheat	cytosol	17.42	46.62
TraesCS1A01G368600.1	Wheat	mitochondrion	45.22	46.26
TraesCS2A01G458700.1	Wheat	cytosol	18.26	44.52
TraesCS6A01G275800.1	Wheat	cytosol	46.07	44.09
TraesCS5A01G451500.1	Wheat	cytosol	44.1	43.25
TraesCS5A01G451900.1	Wheat	cytosol	43.54	43.18
TraesCS4A01G193000.1	Wheat	cytosol	43.54	42.82
TraesCS3A01G212400.1	Wheat	cytosol	41.29	42.73
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	48.31	42.57
TraesCS7A01G511500.1	Wheat	cytosol	43.54	42.12
TraesCS5A01G461800.1	Wheat	cytosol	39.89	42.01
TraesCS2A01G217100.1	Wheat	cytosol	42.42	41.94
TraesCS2A01G418100.1	Wheat	cytosol	43.26	41.85
TraesCS2A01G418000.1	Wheat	cytosol	42.7	41.42
TraesCS5A01G528500.1	Wheat	cytosol	35.67	40.06
TraesCS5A01G451600.1	Wheat	cytosol	38.76	39.54
TraesCS2A01G471000.1	Wheat	cytosol	26.4	39.5
TraesCS6A01G167500.1	Wheat	plastid	36.24	38.62
TraesCS7A01G550800.1	Wheat	cytosol	29.49	38.6
TraesCS4A01G465200.1	Wheat	cytosol	36.52	38.58
TraesCS2A01G472600.1	Wheat	cytosol	36.52	38.24
TraesCS2A01G473400.1	Wheat	cytosol	33.71	38.1
TraesCS2A01G473300.1	Wheat	cytosol	31.18	37.5
TraesCS5A01G528600.1	Wheat	cytosol	37.08	37.08
TraesCS4A01G465700.1	Wheat	cytosol	37.08	36.87
TraesCS2A01G470700.1	Wheat	cytosol, plastid	38.2	36.66
TraesCS2A01G472700.1	Wheat	cytosol	37.08	36.26
TraesCS2A01G473500.1	Wheat	cytosol	35.39	36.0
TraesCS2A01G470000.1	Wheat	plastid	35.67	35.57
TraesCS2A01G470900.1	Wheat	cytosol	35.96	35.56
TraesCS2A01G470400.1	Wheat	cytosol	35.11	34.63
TraesCS5A01G554900.1	Wheat	cytosol	34.27	33.98
TraesCS2A01G543600.1	Wheat	plastid	25.56	33.96
TraesCS2A01G255800.1	Wheat	cytosol	37.64	33.84
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	40.17	33.65
TraesCS2A01G237800.1	Wheat	cytosol	37.64	31.46
TraesCS5A01G361900.1	Wheat	cytosol	31.46	31.2
TraesCS5A01G429400.2	Wheat	cytosol	38.2	31.12
TraesCS2A01G471800.1	Wheat	mitochondrion	33.43	26.33
TraesCS2A01G471700.1	Wheat	cytosol	29.21	24.82

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS3A01G020800	EnsemblPlants:TraesCS3A01G020800.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr3A:-:12117137..12118207

Molecular Weight (calculated)

39671.5 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.196

Length

356 amino acids

Sequence
(BLAST)

001: MESSVPMAVS TCTSETATGK HVFRIADYHI RKGLGVGEYI QSATFAIGGY DWRVRYYPNG AIFPECSGYV SVYLELLTRD AKVRADYEFR LIDSGSTPPP
101: SPVTHLFTNK YNTVDPDEAP ANYGAPRFMK QQEIKPYLRD DCLEIECEVL VINAITKLEV QEVPPSDLPN HLGKLLDGKR GADVTFEVKG EVFSAHKIML
201: ATRSPVFDAQ LYGPLSDADA TSKNIIVKDM EPPVFKALLH FIYTDSLPAM DDVDDGESED MVKHLLVAAD RYAMDRMKLM CEDILCKSLD VETAATTLAL
301: ADQHHCSKLK DACVEYILSS NRLNAMVASK GYAHLKRSCP ALMFDVFERA TKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.