Factsheet for TraesCS4A01G193000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G122200.1	Wheat	cytosol	92.54	91.28
TraesCS5A01G452100.1	Wheat	cytosol	21.82	60.77
Os08t0226800-00	Rice	cytosol	56.63	56.47
TraesCS5A01G462000.1	Wheat	cytosol	26.52	54.86
TraesCS6A01G275800.1	Wheat	cytosol	55.52	54.03
TraesCS2A01G458500.1	Wheat	cytosol	19.61	53.38
TraesCS2A01G508000.1	Wheat	cytosol	20.17	52.14
TraesCS7A01G511200.1	Wheat	cytosol	22.1	51.61
TraesCS7A01G026200.1	Wheat	mitochondrion	45.86	51.08
TraesCS2A01G458700.1	Wheat	cytosol	20.44	50.68
TraesCS5A01G040900.1	Wheat	cytosol	31.49	50.67
TraesCS7A01G311400.1	Wheat	cytosol	25.14	50.0
TraesCS4A01G462500.1	Wheat	mitochondrion	48.9	49.72
TraesCS5A01G451500.1	Wheat	cytosol	49.17	49.04
TraesCS5A01G451900.1	Wheat	cytosol	47.51	47.91
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	45.58	47.41
TraesCS5A01G461800.1	Wheat	cytosol	44.2	47.34
TraesCS2A01G543300.1	Wheat	cytosol	43.65	47.16
TraesCS3A01G164400.1	Wheat	cytosol	32.04	46.96
TraesCS2A01G366500.1	Wheat	cytosol	46.41	46.93
TraesCS3A01G320300.1	Wheat	cytosol	45.3	46.2
TraesCS5A01G451600.1	Wheat	cytosol	44.2	45.85
TraesCS5A01G040800.1	Wheat	cytosol	43.65	45.27
TraesCS7A01G511400.1	Wheat	cytosol	45.03	44.9
TraesCS3A01G019700.1	Wheat	cytosol	44.48	44.48
TraesCS2A01G418100.1	Wheat	cytosol	45.03	44.29
TraesCS2A01G418000.1	Wheat	cytosol	44.75	44.14
TraesCS5A01G041400.1	Wheat	plastid	42.82	44.03
TraesCS5A01G041300.1	Wheat	cytosol	42.54	43.75
TraesCS3A01G020800.1	Wheat	cytosol	42.82	43.54
TraesCS2A01G217100.1	Wheat	cytosol	42.82	43.06
TraesCS2A01G472600.1	Wheat	cytosol	40.33	42.94
TraesCS1A01G368600.1	Wheat	mitochondrion	40.88	42.53
TraesCS3A01G020200.1	Wheat	cytosol	41.44	41.9
TraesCS7A01G511500.1	Wheat	cytosol	42.54	41.85
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	28.45	41.7
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	39.78	41.03
TraesCS5A01G528600.1	Wheat	cytosol	39.78	40.45
TraesCS3A01G212400.1	Wheat	cytosol	38.12	40.12
TraesCS2A01G471000.1	Wheat	cytosol	25.97	39.5
TraesCS4A01G465200.1	Wheat	cytosol	36.74	39.47
TraesCS5A01G528500.1	Wheat	cytosol	34.53	39.43
TraesCS4A01G465700.1	Wheat	cytosol	38.4	38.83
TraesCS6A01G167500.1	Wheat	plastid	35.36	38.32
TraesCS2A01G470000.1	Wheat	plastid	37.57	38.1
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	41.99	37.62
TraesCS7A01G550800.1	Wheat	cytosol	28.18	37.5
TraesCS2A01G470700.1	Wheat	cytosol, plastid	38.4	37.47
TraesCS2A01G470400.1	Wheat	cytosol	37.29	37.4
TraesCS2A01G472700.1	Wheat	cytosol	37.57	37.36
TraesCS5A01G554900.1	Wheat	cytosol	37.02	37.33
TraesCS2A01G470900.1	Wheat	cytosol	36.74	36.94
TraesCS2A01G473300.1	Wheat	cytosol	29.28	35.81
TraesCS2A01G473400.1	Wheat	cytosol	30.94	35.56
TraesCS5A01G361900.1	Wheat	cytosol	34.81	35.1
TraesCS2A01G473500.1	Wheat	cytosol	33.43	34.57
TraesCS2A01G543600.1	Wheat	plastid	25.41	34.33
TraesCS2A01G255800.1	Wheat	cytosol	37.29	34.09
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	39.23	33.41
TraesCS2A01G237800.1	Wheat	cytosol	36.74	31.22
TraesCS5A01G429400.2	Wheat	cytosol	35.36	29.29
TraesCS2A01G471700.1	Wheat	cytosol	32.04	27.68
TraesCS2A01G471800.1	Wheat	mitochondrion	33.15	26.55

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4A01G193000
EnsemblPlants:TraesCS4A01G193000.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:-:473945535..473946623

Molecular Weight (calculated)

39470.2 Da

IEP (calculated)

5.942

GRAVY (calculated)

-0.109

Length

362 amino acids

Sequence
(BLAST)

001: MALESKSSSR CTTETAKGTH VLEIVGYSLK KGLGIGKFVQ SAIVTVGGYD WTIRFYPDGA NISYADCVCV SVSRDLTGKS KGVARASCDL RLVNKDTGLP
101: KSIWYPSQPT PSVFDYNNRV FPECGGSIER SELELEASGY IKDDSLTIEC VLTVIKQSQV TKTTGSSEIK VSSSNLSDHF GKLLLEGKGS DVTFSVGGET
201: FAAHKIILAA RSPVFEAEMY GGMKEGKAES ITVEDMQPAA FKALLHFVYT DSLPDVGDFG GDDYVEMIRH LLVAADRYAM DRLKLICQNI LGKNLAMETL
301: ATTLALADHH NCDRLKEACI EFIASKDEMD ALMATQGYSN LKRTCPSVLI DVFEKASRLR RA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.