Factsheet for TraesCS2A01G470900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G465700.1	Wheat	cytosol	55.0	55.31
TraesCS2A01G470400.1	Wheat	cytosol	55.28	55.12
TraesCS5A01G528500.1	Wheat	cytosol	47.78	54.26
TraesCS2B01G494000.1	Wheat	cytosol	53.06	53.5
TraesCS4A01G465200.1	Wheat	cytosol	49.72	53.12
TraesCS5A01G528600.1	Wheat	cytosol	52.5	53.09
TraesCS5A01G554900.1	Wheat	cytosol	52.22	52.37
TraesCS2A01G470700.1	Wheat	cytosol, plastid	53.89	52.29
TraesCS2A01G472600.1	Wheat	cytosol	48.33	51.18
TraesCS2A01G470000.1	Wheat	plastid	50.28	50.7
TraesCS2A01G472700.1	Wheat	cytosol	51.11	50.55
TraesCS5A01G361900.1	Wheat	cytosol	50.28	50.42
TraesCS2A01G471000.1	Wheat	cytosol	30.56	46.22
TraesCS2A01G473400.1	Wheat	cytosol	40.28	46.03
TraesCS2A01G473300.1	Wheat	cytosol	37.22	45.27
TraesCS2A01G473500.1	Wheat	cytosol	43.61	44.86
TraesCS5A01G462000.1	Wheat	cytosol	21.67	44.57
TraesCS6A01G275800.1	Wheat	cytosol	43.89	42.47
TraesCS2A01G508000.1	Wheat	cytosol	16.11	41.43
TraesCS3A01G164400.1	Wheat	cytosol	28.06	40.89
TraesCS5A01G040900.1	Wheat	cytosol	25.56	40.89
TraesCS2A01G458500.1	Wheat	cytosol	15.0	40.6
TraesCS2A01G458700.1	Wheat	cytosol	16.39	40.41
TraesCS5A01G452100.1	Wheat	cytosol	14.44	40.0
TraesCS7A01G026200.1	Wheat	mitochondrion	36.11	40.0
TraesCS4A01G462500.1	Wheat	mitochondrion	39.17	39.61
TraesCS7A01G311400.1	Wheat	cytosol	20.0	39.56
TraesCS2A01G471800.1	Wheat	mitochondrion	48.89	38.94
TraesCS2A01G471700.1	Wheat	cytosol	45.0	38.66
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	36.94	38.22
TraesCS5A01G041400.1	Wheat	plastid	36.39	37.22
TraesCS2A01G543300.1	Wheat	cytosol	34.44	37.01
TraesCS7A01G511200.1	Wheat	cytosol	15.83	36.77
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	35.83	36.75
TraesCS4A01G193000.1	Wheat	cytosol	36.94	36.74
TraesCS3A01G020200.1	Wheat	cytosol	36.39	36.59
TraesCS3A01G019700.1	Wheat	cytosol	36.67	36.46
TraesCS5A01G040800.1	Wheat	cytosol	35.28	36.39
TraesCS3A01G320300.1	Wheat	cytosol	35.83	36.34
TraesCS5A01G451900.1	Wheat	cytosol	36.11	36.21
TraesCS5A01G451600.1	Wheat	cytosol	35.0	36.1
TraesCS2A01G418000.1	Wheat	cytosol	36.67	35.97
TraesCS3A01G020800.1	Wheat	cytosol	35.56	35.96
TraesCS5A01G041300.1	Wheat	cytosol	34.72	35.51
TraesCS2A01G366500.1	Wheat	cytosol	35.0	35.2
TraesCS3A01G212400.1	Wheat	cytosol	33.61	35.17
TraesCS2A01G418100.1	Wheat	cytosol	35.83	35.05
TraesCS5A01G451500.1	Wheat	cytosol	35.28	34.99
TraesCS7A01G511400.1	Wheat	cytosol	35.0	34.71
TraesCS1A01G368600.1	Wheat	mitochondrion	33.33	34.48
TraesCS2A01G217100.1	Wheat	cytosol	34.44	34.44
TraesCS5A01G461800.1	Wheat	cytosol	32.22	34.32
TraesCS6A01G167500.1	Wheat	plastid	31.67	34.13
TraesCS7A01G511500.1	Wheat	cytosol	34.44	33.7
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	37.78	33.66
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	23.06	33.6
TraesCS7A01G550800.1	Wheat	cytosol	24.17	31.99
TraesCS2A01G255800.1	Wheat	cytosol	35.0	31.82
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	37.5	31.76
TraesCS5A01G429400.2	Wheat	cytosol	35.83	29.52
TraesCS2A01G237800.1	Wheat	cytosol	34.72	29.34
TraesCS2A01G543600.1	Wheat	plastid	18.89	25.37

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2A01G470900	EnsemblPlants:TraesCS2A01G470900.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:713246850..713247932

Molecular Weight (calculated)

39948.0 Da

IEP (calculated)

6.967

GRAVY (calculated)

-0.166

Length

360 amino acids

Sequence
(BLAST)

001: MGNRSSSSAK PGQSPSETAS RCLTESFTGT HDFEIINYSL LVGMGVGKFV SSSTFCVGGY NWNIRLYPDG VTKDHAGKGS VFLHHLCSPD SKGVRTKFTL
101: SVLEKHGQVT RALVDHIFPR AHTSDGFGYT RFFDNSKLKS MPDLYYGSLT IRCVLTIIKE SHTELKTNLA VAPPSNLQEH LRHMHVDGDG ADVTFSVRGQ
201: LFNAHRCLLA ARSPVFKAEL FGPMKENSTR CIEIDDIEPQ VFEALLHFIY TDCMMDGYEE GKTENLQHLL VAADLYGVER LRVMCEGKLC DSIDLKTVAT
301: TLTLAEQHNC GVLKKACIEF LASGKTLEAV KKTDSDVFKH LEASCPHLMQ EILFARMPPM

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.