Factsheet for TraesCS2A01G470400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G470700.1	Wheat	cytosol	94.74	94.74
TraesCS2B01G493100.1	Wheat	cytosol	93.35	91.58
TraesCS2A01G470000.1	Wheat	plastid	62.88	63.59
TraesCS2A01G470700.1	Wheat	cytosol, plastid	62.33	60.65
TraesCS2A01G470900.1	Wheat	cytosol	55.12	55.28
TraesCS4A01G465700.1	Wheat	cytosol	53.74	54.19
TraesCS2A01G472700.1	Wheat	cytosol	54.57	54.12
TraesCS5A01G528600.1	Wheat	cytosol	52.63	53.37
TraesCS5A01G528500.1	Wheat	cytosol	46.26	52.68
TraesCS2A01G472600.1	Wheat	cytosol	49.31	52.35
TraesCS5A01G554900.1	Wheat	cytosol	51.52	51.81
TraesCS4A01G465200.1	Wheat	cytosol	47.92	51.34
TraesCS2A01G473400.1	Wheat	cytosol	42.11	48.25
TraesCS5A01G361900.1	Wheat	cytosol	47.92	48.19
TraesCS2A01G473300.1	Wheat	cytosol	38.5	46.96
TraesCS2A01G471000.1	Wheat	cytosol	29.64	44.96
TraesCS2A01G473500.1	Wheat	cytosol	42.66	44.0
TraesCS5A01G452100.1	Wheat	cytosol	15.79	43.85
TraesCS7A01G311400.1	Wheat	cytosol	21.88	43.41
TraesCS5A01G462000.1	Wheat	cytosol	20.78	42.86
TraesCS2A01G508000.1	Wheat	cytosol	16.34	42.14
TraesCS2A01G458500.1	Wheat	cytosol	15.51	42.11
TraesCS7A01G511200.1	Wheat	cytosol	18.01	41.94
TraesCS3A01G164400.1	Wheat	cytosol	27.7	40.49
TraesCS2A01G458700.1	Wheat	cytosol	16.34	40.41
TraesCS7A01G026200.1	Wheat	mitochondrion	35.18	39.08
TraesCS2A01G471700.1	Wheat	cytosol	45.15	38.9
TraesCS4A01G462500.1	Wheat	mitochondrion	38.23	38.76
TraesCS5A01G040900.1	Wheat	cytosol	24.1	38.67
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	36.84	37.89
TraesCS6A01G275800.1	Wheat	cytosol	38.78	37.63
TraesCS4A01G193000.1	Wheat	cytosol	37.4	37.29
TraesCS5A01G041400.1	Wheat	plastid	36.01	36.93
TraesCS2A01G471800.1	Wheat	mitochondrion	45.98	36.73
TraesCS2A01G543300.1	Wheat	cytosol	34.07	36.72
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	35.18	36.49
TraesCS5A01G451600.1	Wheat	cytosol	34.9	36.1
TraesCS3A01G020200.1	Wheat	cytosol	35.46	35.75
TraesCS7A01G511400.1	Wheat	cytosol	35.46	35.26
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	24.1	35.22
TraesCS3A01G020800.1	Wheat	cytosol	34.63	35.11
TraesCS3A01G019700.1	Wheat	cytosol	35.18	35.08
TraesCS3A01G212400.1	Wheat	cytosol	33.24	34.88
TraesCS7A01G511500.1	Wheat	cytosol	35.46	34.78
TraesCS5A01G040800.1	Wheat	cytosol	33.52	34.67
TraesCS2A01G366500.1	Wheat	cytosol	34.35	34.64
TraesCS5A01G451500.1	Wheat	cytosol	34.63	34.44
TraesCS5A01G041300.1	Wheat	cytosol	33.52	34.38
TraesCS3A01G320300.1	Wheat	cytosol	33.8	34.37
TraesCS5A01G451900.1	Wheat	cytosol	33.8	33.98
TraesCS2A01G217100.1	Wheat	cytosol	33.8	33.89
TraesCS2A01G418000.1	Wheat	cytosol	34.07	33.52
TraesCS2A01G418100.1	Wheat	cytosol	34.07	33.42
TraesCS6A01G167500.1	Wheat	plastid	30.75	33.23
TraesCS5A01G461800.1	Wheat	cytosol	30.75	32.84
TraesCS1A01G368600.1	Wheat	mitochondrion	31.58	32.76
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	36.57	32.67
TraesCS2A01G255800.1	Wheat	cytosol	35.73	32.58
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	38.23	32.47
TraesCS7A01G550800.1	Wheat	cytosol	24.1	31.99
TraesCS5A01G429400.2	Wheat	cytosol	35.46	29.29
TraesCS2A01G237800.1	Wheat	cytosol	33.8	28.64
TraesCS2A01G543600.1	Wheat	plastid	18.01	24.25

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2A01G470400
EnsemblPlants:TraesCS2A01G470400.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr2A:-:713123699..713124784

Molecular Weight (calculated)

40323.6 Da

IEP (calculated)

6.503

GRAVY (calculated)

-0.145

Length

361 amino acids

Sequence
(BLAST)

001: MANKSTSEVS HGQLPKTSST CLTEGVTAVH DFEVANYRLL DGIGVGKHVR SSNFSVGGFE WFMNFFPDGR MADYAGYASV FLDRVIQQND THNVRTKFTL
101: NMLEKDGEAQ LTKCDEIGHV FSSAKSYWGY CRFVAKEKLK SSSQANNGLL IIRCVLTVIK EPRTEVKRNT VVVPQPNLQD QLCQMWKDGQ GADVTFSVGG
201: QLFKAHRCLL AARSLVFKAE LLGPMKEKET HCIKIDDIDP EIFEALLHFI YTDSLIVDEH HKEGEIAKLQ HLLVASDRYG LDRLNVMCES KLSECIDAET
301: VATTLVLAEQ HHCKDLKEAC IEFMAPRNVL QAVMATDGFK HLVASCPLVM KELLDMVSRG G

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.