Factsheet for TraesCS4A01G465700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G465200.1	Wheat	cytosol	87.15	92.58
TraesCS5A01G528600.1	Wheat	cytosol	79.05	79.49
TraesCS4B01G360400.1	Wheat	cytosol	78.77	79.44
TraesCS5A01G528500.1	Wheat	cytosol	69.83	78.86
TraesCS5A01G554900.1	Wheat	cytosol	77.93	77.72
TraesCS3D01G513100.1	Wheat	cytosol, plastid	75.98	77.05
TraesCS5A01G361900.1	Wheat	cytosol	74.3	74.09
TraesCS2A01G472600.1	Wheat	cytosol	56.7	59.71
OQU82373	Sorghum	cytosol, plastid	53.63	56.64
OQU82372	Sorghum	plastid	53.35	56.01
TraesCS2A01G470900.1	Wheat	cytosol	55.31	55.0
TraesCS2A01G470400.1	Wheat	cytosol	54.19	53.74
TraesCS2A01G470000.1	Wheat	plastid	51.68	51.82
TraesCS2A01G472700.1	Wheat	cytosol	52.51	51.65
Os04t0625500-00	Rice	plastid	53.63	51.2
Os04t0625400-00	Rice	plastid	46.65	50.61
TraesCS2A01G470700.1	Wheat	cytosol, plastid	51.96	50.13
TraesCS5A01G462000.1	Wheat	cytosol	23.74	48.57
TraesCS2A01G473400.1	Wheat	cytosol	42.46	48.25
TraesCS2A01G473300.1	Wheat	cytosol	39.11	47.3
TraesCS2A01G471000.1	Wheat	cytosol	30.73	46.22
EES11459	Sorghum	plastid	48.32	45.41
TraesCS2A01G471700.1	Wheat	cytosol	52.51	44.87
TraesCS2A01G473500.1	Wheat	cytosol	43.58	44.57
TraesCS5A01G452100.1	Wheat	cytosol	15.64	43.08
TraesCS2A01G471800.1	Wheat	mitochondrion	54.19	42.92
TraesCS2A01G508000.1	Wheat	cytosol	15.92	40.71
TraesCS7A01G511200.1	Wheat	cytosol	17.6	40.65
TraesCS7A01G026200.1	Wheat	mitochondrion	36.87	40.62
TraesCS4A01G462500.1	Wheat	mitochondrion	39.94	40.17
TraesCS3A01G164400.1	Wheat	cytosol	27.37	39.68
TraesCS7A01G311400.1	Wheat	cytosol	20.11	39.56
TraesCS5A01G040900.1	Wheat	cytosol	24.86	39.56
TraesCS6A01G275800.1	Wheat	cytosol	40.78	39.25
TraesCS5A01G041400.1	Wheat	plastid	37.99	38.64
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	37.71	38.46
TraesCS4A01G193000.1	Wheat	cytosol	38.83	38.4
TraesCS5A01G041300.1	Wheat	cytosol	37.71	38.35
TraesCS2A01G543300.1	Wheat	cytosol	35.47	37.91
TraesCS5A01G040800.1	Wheat	cytosol	36.87	37.82
TraesCS3A01G020200.1	Wheat	cytosol	37.71	37.71
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	36.31	37.36
TraesCS5A01G451500.1	Wheat	cytosol	37.71	37.19
TraesCS3A01G020800.1	Wheat	cytosol	36.87	37.08
TraesCS2A01G458700.1	Wheat	cytosol	15.08	36.99
TraesCS7A01G511400.1	Wheat	cytosol	37.43	36.91
TraesCS2A01G458500.1	Wheat	cytosol	13.69	36.84
TraesCS3A01G019700.1	Wheat	cytosol	37.15	36.74
TraesCS2A01G418000.1	Wheat	cytosol	37.43	36.51
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	25.14	36.44
TraesCS5A01G451900.1	Wheat	cytosol	36.31	36.21
TraesCS2A01G418100.1	Wheat	cytosol	37.15	36.14
TraesCS5A01G461800.1	Wheat	cytosol	34.08	36.09
TraesCS2A01G366500.1	Wheat	cytosol	36.03	36.03
TraesCS5A01G451600.1	Wheat	cytosol	34.92	35.82
TraesCS7A01G550800.1	Wheat	cytosol	27.09	35.66
TraesCS7A01G511500.1	Wheat	cytosol	36.59	35.6
TraesCS3A01G212400.1	Wheat	cytosol	34.08	35.47
TraesCS6A01G167500.1	Wheat	plastid	32.4	34.73
TraesCS3A01G320300.1	Wheat	cytosol	34.36	34.65
TraesCS2A01G255800.1	Wheat	cytosol	38.27	34.6
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	40.5	34.12
TraesCS1A01G368600.1	Wheat	mitochondrion	32.68	33.62
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	37.71	33.42
TraesCS2A01G217100.1	Wheat	cytosol	33.24	33.06
TraesCS2A01G237800.1	Wheat	cytosol	37.71	31.69
TraesCS5A01G429400.2	Wheat	cytosol	38.55	31.58
TraesCS2A01G543600.1	Wheat	plastid	18.16	24.25

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4A01G465700	EnsemblPlants:TraesCS4A01G465700.1	TIGR:cd00121	TIGR:cd14736	SEG:seg

Description

No Description!

Coordinates

chr4A:+:729114056..729115132

Molecular Weight (calculated)

39354.2 Da

IEP (calculated)

5.800

GRAVY (calculated)

-0.036

Length

358 amino acids

Sequence
(BLAST)

001: MANNSTSSVN KPISETSSRC LTECVTIAHN FEVTKYSLLE GMGIGKFVTS STFSVGGYEW NILIYPDGSN EEDKAAYMSA FLCFCRGATA GVKVKFTLSL
101: LEKDGTASVM GGETRTFPPE GQTWGWAKFI DKSKLKELLS RNDDCFTIRC VLTVIKDIRT EDASTALVPL PPSDLHTHFA NMLKDGHGMD VTFSVGGQLF
201: SAHRCVLAAR SSVFKAELFG QMKETSLKCI EIDDMETTIF EALLHFIYTD SLPSNWDLDQ NVELQHLLVA ADRYGLDRLK AMCEGKLCQR IDVQTVATTL
301: ALAEQHHAAQ LKGACLTYLS SQGVLRAVKE TDGFKHLTAS CPWIMMDILD KVAPPSGV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.