Factsheet for TraesCS3A01G020200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G019700.1	Wheat	cytosol	87.15	86.19
TraesCS3A01G020800.1	Wheat	cytosol	81.28	81.74
TraesCS3D01G026900.1	Wheat	cytosol	74.58	73.55
TraesCS3B01G026400.1	Wheat	cytosol	73.74	72.93
TraesCS3B01G060200.1	Wheat	cytosol	73.46	72.65
TraesCS2A01G508000.1	Wheat	cytosol	24.58	62.86
TraesCS5A01G040900.1	Wheat	cytosol	37.99	60.44
TraesCS5A01G452100.1	Wheat	cytosol	20.67	56.92
TraesCS7A01G026200.1	Wheat	mitochondrion	48.32	53.23
TraesCS5A01G462000.1	Wheat	cytosol	25.98	53.14
TraesCS5A01G041400.1	Wheat	plastid	52.23	53.12
TraesCS4A01G462500.1	Wheat	mitochondrion	52.79	53.09
TraesCS5A01G040800.1	Wheat	cytosol	51.68	53.01
TraesCS7A01G511200.1	Wheat	cytosol	22.91	52.9
TraesCS5A01G041300.1	Wheat	cytosol	51.96	52.84
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	50.84	52.3
TraesCS2A01G366500.1	Wheat	cytosol	51.4	51.4
TraesCS2A01G543300.1	Wheat	cytosol	46.93	50.15
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	49.16	50.14
TraesCS3A01G320300.1	Wheat	cytosol	48.32	48.73
TraesCS2A01G458500.1	Wheat	cytosol	17.88	48.12
TraesCS7A01G311400.1	Wheat	cytosol	24.02	47.25
TraesCS7A01G511400.1	Wheat	cytosol	47.49	46.83
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	32.12	46.56
TraesCS3A01G164400.1	Wheat	cytosol	31.84	46.15
TraesCS2A01G458700.1	Wheat	cytosol	18.72	45.89
TraesCS5A01G451500.1	Wheat	cytosol	45.53	44.9
TraesCS1A01G368600.1	Wheat	mitochondrion	43.02	44.25
TraesCS6A01G275800.1	Wheat	cytosol	45.81	44.09
TraesCS5A01G451900.1	Wheat	cytosol	44.13	44.01
TraesCS5A01G461800.1	Wheat	cytosol	40.78	43.2
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	48.6	43.07
TraesCS7A01G511500.1	Wheat	cytosol	43.3	42.12
TraesCS2A01G418100.1	Wheat	cytosol	42.74	41.58
TraesCS5A01G451600.1	Wheat	cytosol	40.5	41.55
TraesCS4A01G193000.1	Wheat	cytosol	41.9	41.44
TraesCS3A01G212400.1	Wheat	cytosol	39.66	41.28
TraesCS2A01G418000.1	Wheat	cytosol	42.18	41.14
TraesCS6A01G167500.1	Wheat	plastid	38.27	41.02
TraesCS2A01G217100.1	Wheat	cytosol	41.06	40.83
TraesCS4A01G465200.1	Wheat	cytosol	37.71	40.06
TraesCS5A01G528500.1	Wheat	cytosol	34.92	39.43
TraesCS2A01G472600.1	Wheat	cytosol	37.15	39.12
TraesCS2A01G543600.1	Wheat	plastid	29.05	38.81
TraesCS2A01G471000.1	Wheat	cytosol	25.7	38.66
TraesCS7A01G550800.1	Wheat	cytosol	29.33	38.6
TraesCS2A01G473500.1	Wheat	cytosol	37.71	38.57
TraesCS2A01G473400.1	Wheat	cytosol	33.24	37.78
TraesCS4A01G465700.1	Wheat	cytosol	37.71	37.71
TraesCS5A01G528600.1	Wheat	cytosol	37.43	37.64
TraesCS2A01G470700.1	Wheat	cytosol, plastid	38.27	36.93
TraesCS2A01G472700.1	Wheat	cytosol	37.43	36.81
TraesCS2A01G473300.1	Wheat	cytosol	30.17	36.49
TraesCS2A01G470900.1	Wheat	cytosol	36.59	36.39
TraesCS2A01G470000.1	Wheat	plastid	36.03	36.13
TraesCS5A01G554900.1	Wheat	cytosol	35.75	35.65
TraesCS2A01G470400.1	Wheat	cytosol	35.75	35.46
TraesCS2A01G255800.1	Wheat	cytosol	37.43	33.84
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	39.39	33.18
TraesCS5A01G361900.1	Wheat	cytosol	32.4	32.31
TraesCS2A01G237800.1	Wheat	cytosol	36.31	30.52
TraesCS5A01G429400.2	Wheat	cytosol	37.15	30.43
TraesCS2A01G471800.1	Wheat	mitochondrion	33.52	26.55
TraesCS2A01G471700.1	Wheat	cytosol	30.17	25.78

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3A01G020200	EnsemblPlants:TraesCS3A01G020200.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr3A:+:11920649..11921725

Molecular Weight (calculated)

39878.4 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.285

Length

358 amino acids

Sequence
(BLAST)

001: MEPPLPTTVS TCTSETARGK HVFNIAGYHL HKGMGAGESI RSATFAVGGY DWCVRYYPYG DISRDCRGYV SVYLELLTRD AEVRADYVFR LIDNSGSALP
101: SVVRRFTSKY TPVDPDEDPD GYGANKFMKQ SELASYLRDD RLVIECEVKV INAKTKTEVQ DVPPSDLPNH LGKLLDGKRG ADVTFEVEGE VFSAHNSQDY
201: ARYAIAPVFD AQLYGPLSDA GAMSKNIIVK DMEPPVFKAL LHFIYTDSLP AMDDADDGES EDMVKHLLVA ADRYAMDRMK MMCEDILCKS LDVETAATTL
301: ALADQHHCSK LKDACVEYIL SSNRLNAVVA SREYAHLKRS CPALMFDVFE RATKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.