Factsheet for TraesCS3B01G060200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G026900.1	Wheat	cytosol	93.65	93.39
TraesCS3B01G026400.1	Wheat	cytosol	92.54	92.54
TraesCS3A01G019700.1	Wheat	cytosol	77.9	77.9
TraesCS3A01G020200.1	Wheat	cytosol	72.65	73.46
TraesCS5B01G042100.1	Wheat	cytosol	24.59	70.08
TraesCS2B01G384100.1	Wheat	cytosol	37.29	63.68
TraesCS3B01G025700.1	Wheat	cytosol	65.75	61.5
TraesCS2B01G574000.1	Wheat	cytosol, plastid	38.95	56.63
TraesCS5B01G042000.1	Wheat	cytosol	54.7	56.41
TraesCS5B01G042300.1	Wheat	plastid	51.93	53.56
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	51.1	53.16
TraesCS7B01G421900.1	Wheat	cytosol	53.59	52.86
TraesCS6B01G443900.1	Wheat	cytosol	51.1	52.71
TraesCS2B01G383700.1	Wheat	mitochondrion	53.04	52.46
TraesCS2B01G383800.1	Wheat	mitochondrion	51.66	52.38
TraesCS2B01G383900.1	Wheat	mitochondrion	53.04	52.17
TraesCS5B01G043200.1	Wheat	plastid	50.28	52.0
TraesCS2B01G573600.1	Wheat	cytosol	46.41	51.38
TraesCS2B01G573200.1	Wheat	cytosol	46.13	50.45
TraesCS7B01G422200.1	Wheat	cytosol	50.0	50.42
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	49.72	49.59
TraesCS7B01G423000.1	Wheat	cytosol, plastid	50.55	49.33
TraesCS3B01G345400.1	Wheat	cytosol	49.72	49.32
TraesCS7B01G422800.1	Wheat	cytosol, plastid	49.72	48.78
TraesCS2B01G074000.1	Wheat	cytosol	45.3	47.95
TraesCS1B01G387500.1	Wheat	cytosol, plastid	48.07	47.67
TraesCS7B01G049700.1	Wheat	cytosol	46.13	46.91
TraesCS6B01G303100.1	Wheat	cytosol	46.96	46.83
TraesCS2B01G436900.1	Wheat	peroxisome	19.89	46.75
TraesCS2B01G573800.1	Wheat	plastid	35.64	46.57
TraesCS5B01G460300.1	Wheat	cytosol	46.69	46.56
TraesCS3B01G201600.1	Wheat	cytosol	44.2	46.51
TraesCS5B01G472700.1	Wheat	cytosol	45.3	46.46
TraesCS5B01G472100.1	Wheat	cytosol	44.75	45.89
TraesCS5B01G460600.1	Wheat	cytosol	45.03	45.53
TraesCS5B01G460400.1	Wheat	cytosol	44.75	44.63
TraesCS5B01G472600.1	Wheat	cytosol	43.65	44.26
TraesCS5B01G472500.1	Wheat	cytosol	43.09	44.19
TraesCS7B01G422300.1	Wheat	cytosol	44.75	44.02
TraesCS5B01G472400.1	Wheat	cytosol	33.15	43.32
TraesCS7B01G422500.1	Wheat	cytosol	43.92	43.21
TraesCS7B01G422400.1	Wheat	cytosol	43.65	42.93
TraesCS4B01G122200.1	Wheat	cytosol	43.37	42.78
TraesCS3B01G507600.1	Wheat	cytosol	34.25	42.32
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	44.75	41.86
TraesCS7B01G211100.1	Wheat	cytosol, plastid	40.88	40.55
TraesCS2B01G496200.1	Wheat	cytosol	37.02	38.29
TraesCS2B01G496300.1	Wheat	cytosol	37.29	37.92
TraesCS4B01G360400.1	Wheat	cytosol	37.02	37.75
TraesCS4B01G360000.1	Wheat	cytosol	37.29	37.71
TraesCS2B01G496400.1	Wheat	cytosol	36.74	37.68
TraesCS2B01G493600.1	Wheat	cytosol	37.57	37.67
TraesCS2B01G494000.1	Wheat	cytosol	36.74	37.25
TraesCS2B01G496500.1	Wheat	cytosol	35.36	36.57
TraesCS2B01G492800.1	Wheat	plastid	36.46	36.57
TraesCS4B01G392200.1	Wheat	cytosol	36.19	36.49
TraesCS2B01G495400.1	Wheat	cytosol	36.46	36.26
TraesCS5B01G364400.1	Wheat	plastid	36.46	36.07
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	40.61	34.59
TraesCS2B01G494600.1	Wheat	cytosol	34.81	34.15
TraesCS2B01G493100.1	Wheat	cytosol	34.53	33.97
TraesCS7B01G211000.1	Wheat	cytosol	29.83	33.64
TraesCS2B01G493500.1	Wheat	cytosol	33.15	33.24
TraesCS2B01G262200.1	Wheat	cytosol	37.02	31.46
TraesCS5B01G431400.2	Wheat	cytosol	37.29	30.89
TraesCS2B01G493700.2	Wheat	cytosol	35.91	25.24

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS3B01G060200	EnsemblPlants:TraesCS3B01G060200.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr3B:+:31983277..31984365

Molecular Weight (calculated)

40431.5 Da

IEP (calculated)

5.392

GRAVY (calculated)

-0.068

Length

362 amino acids

Sequence
(BLAST)

001: MEQSLPTTVS TCTSDTAMGK HVFKIVGYHL HKGLGVGKYI RSATFAVGGY DWCVRYYPDG YSSPECNGYI SVYLELLSRN AEVRANYTFS LIDSGGGCAQ
101: PWSPFIRRFA HNYTSVDVSY GADMFIEQTA LELVPYLRDD TVVIECEVKV IRWPRVQEET VLAATHIEVP PSDLSIHLGK LLDGKRGADV TFEVKGEVFP
201: AHKIMLATWS PVFDAQVYGP MSDANATSKN IIVEDMEPPV FRALLHFIYT DSLPAMDDLD DGENQDMVKH LMVAADRYAM DRMKMICEGI LCKSLEVETV
301: AMTLALADQH HCSKLKDACV EFILSSNRMD DVVASQGYAH LKRSCPALMF DVFEKATKSR KI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.