Factsheet for TraesCS4B01G392200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G034400.1	Wheat	cytosol	82.17	81.94
TraesCS5A01G554900.1	Wheat	cytosol	79.39	79.39
TraesCS4B01G360400.1	Wheat	cytosol	72.98	73.8
TraesCS4B01G360000.1	Wheat	cytosol	73.54	73.74
TraesCS5B01G364400.1	Wheat	plastid	71.31	69.95
OQU82373	Sorghum	cytosol, plastid	49.03	51.92
OQU82372	Sorghum	plastid	49.3	51.91
TraesCS2B01G494600.1	Wheat	cytosol	53.2	51.76
TraesCS2B01G493600.1	Wheat	cytosol	51.53	51.25
TraesCS2B01G492800.1	Wheat	plastid	51.25	50.97
TraesCS2B01G493100.1	Wheat	cytosol	51.53	50.27
TraesCS2B01G493500.1	Wheat	cytosol	50.42	50.14
TraesCS2B01G495400.1	Wheat	cytosol	50.42	49.73
Os04t0625500-00	Rice	plastid	49.3	47.2
Os04t0625400-00	Rice	plastid	42.34	46.06
TraesCS2B01G494000.1	Wheat	cytosol	44.29	44.54
EES11459	Sorghum	plastid	46.24	43.57
TraesCS2B01G384100.1	Wheat	cytosol	25.35	42.92
TraesCS2B01G496500.1	Wheat	cytosol	41.78	42.86
TraesCS2B01G496300.1	Wheat	cytosol	42.06	42.42
TraesCS2B01G496200.1	Wheat	cytosol	40.67	41.71
TraesCS2B01G496400.1	Wheat	cytosol	40.95	41.64
TraesCS2B01G574000.1	Wheat	cytosol, plastid	28.69	41.37
TraesCS5B01G042100.1	Wheat	cytosol	14.48	40.94
TraesCS2B01G436900.1	Wheat	peroxisome	17.55	40.91
TraesCS2B01G383800.1	Wheat	mitochondrion	39.55	39.78
TraesCS2B01G074000.1	Wheat	cytosol	36.77	38.6
TraesCS2B01G383900.1	Wheat	mitochondrion	38.72	37.77
TraesCS2B01G573600.1	Wheat	cytosol	34.26	37.61
TraesCS3B01G201600.1	Wheat	cytosol	35.93	37.5
TraesCS5B01G042000.1	Wheat	cytosol	36.21	37.04
TraesCS3B01G026400.1	Wheat	cytosol	37.33	37.02
TraesCS2B01G573200.1	Wheat	cytosol	33.98	36.86
TraesCS2B01G383700.1	Wheat	mitochondrion	37.33	36.61
TraesCS4B01G122200.1	Wheat	cytosol	37.33	36.51
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	35.38	36.49
TraesCS7B01G421900.1	Wheat	cytosol	37.05	36.24
TraesCS3B01G060200.1	Wheat	cytosol	36.49	36.19
TraesCS6B01G443900.1	Wheat	cytosol	35.38	36.18
TraesCS6B01G303100.1	Wheat	cytosol	36.49	36.09
TraesCS5B01G472600.1	Wheat	cytosol	35.65	35.85
TraesCS5B01G460400.1	Wheat	cytosol	36.21	35.81
TraesCS5B01G460600.1	Wheat	cytosol	35.65	35.75
TraesCS5B01G472100.1	Wheat	cytosol	35.1	35.69
TraesCS7B01G423000.1	Wheat	cytosol, plastid	36.49	35.31
TraesCS3B01G507600.1	Wheat	cytosol	28.69	35.15
TraesCS5B01G472700.1	Wheat	cytosol	34.54	35.13
TraesCS5B01G472500.1	Wheat	cytosol	34.54	35.13
TraesCS7B01G049700.1	Wheat	cytosol	34.82	35.11
TraesCS5B01G042300.1	Wheat	plastid	34.26	35.04
TraesCS5B01G472400.1	Wheat	cytosol	27.02	35.02
TraesCS5B01G460300.1	Wheat	cytosol	35.38	34.99
TraesCS7B01G422800.1	Wheat	cytosol, plastid	35.65	34.69
TraesCS5B01G043200.1	Wheat	plastid	33.43	34.29
TraesCS1B01G387500.1	Wheat	cytosol, plastid	34.82	34.25
TraesCS7B01G211100.1	Wheat	cytosol, plastid	34.54	33.97
TraesCS7B01G422200.1	Wheat	cytosol	33.7	33.7
TraesCS7B01G422300.1	Wheat	cytosol	34.54	33.7
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	39.83	33.65
TraesCS7B01G422500.1	Wheat	cytosol	34.26	33.42
TraesCS7B01G422400.1	Wheat	cytosol	33.98	33.15
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	33.43	33.06
TraesCS2B01G573800.1	Wheat	plastid	24.79	32.13
TraesCS3B01G025700.1	Wheat	cytosol	34.54	32.04
TraesCS3B01G345400.1	Wheat	cytosol	32.31	31.78
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	33.98	31.52
TraesCS2B01G262200.1	Wheat	cytosol	37.05	31.22
TraesCS5B01G431400.2	Wheat	cytosol	36.21	29.75
TraesCS2B01G493700.2	Wheat	cytosol	40.11	27.96
TraesCS7B01G211000.1	Wheat	cytosol	24.51	27.41

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4B01G392200	EnsemblPlants:TraesCS4B01G392200.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr4B:-:667563369..667564460

Molecular Weight (calculated)

40085.0 Da

IEP (calculated)

6.688

GRAVY (calculated)

-0.153

Length

359 amino acids

Sequence
(BLAST)

001: MANNSTSSVD KPIPETSSRY LTDCVTSHNF GVTRYSLLDG RGINNFISSS RFSVSGFDWN IRIYPDGERE QDKAAYMSVF LCFCSGATMD VKVKFTLSLL
101: GKDGKISNLN SKTTTANFKP VGDTWGWDKF IGKSRLQELL SCNDDCFTIR CVLTIIKDHH TEDVSTVLVP VPQSDLHTHL ANMLKDGQGV DVTFSVGGQL
201: FSAHRYVLAA RLSVFKAELF GQMKETTMER IKIDDMEPAI FDALLHFIYT DNLPNKCDVD QNVALQHLLV ATDRYGLERL KAICEGRLCH RIDVQTVATT
301: LALAEQHHTP HLKNACLRYL CSRDVLPAVK ETDGFKHLTA SCPEIMMESF EKVVPPSGV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.