CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G528600.1	Wheat	cytosol	56.93	54.21
TraesCS4A01G465700.1	Wheat	cytosol	56.64	53.63
TraesCS4B01G360400.1	Wheat	cytosol	55.46	52.96
TraesCS3D01G513100.1	Wheat	cytosol, plastid	54.57	52.41
TraesCS4A01G465200.1	Wheat	cytosol	51.33	51.63
TraesCS5A01G528500.1	Wheat	cytosol	48.08	51.42
OQU82372	Sorghum	plastid	50.74	50.44
TraesCS5A01G554900.1	Wheat	cytosol	52.51	49.58
HORVU5Hr1G089030.1	Barley	cytosol	51.92	49.58
TraesCSU01G034400.1	Wheat	cytosol	52.51	49.44
TraesCS4B01G360000.1	Wheat	cytosol	52.21	49.44
TraesCS5D01G370700.1	Wheat	cytosol	40.41	49.28
TraesCS4D01G353300.1	Wheat	cytosol	51.92	49.16
TraesCS4B01G392200.1	Wheat	cytosol	51.92	49.03
TraesCS5B01G364400.1	Wheat	plastid	52.51	48.63
TraesCS2D01G472200.1	Wheat	cytosol	48.67	48.53
TraesCS2A01G472600.1	Wheat	cytosol	47.79	47.65
TraesCS5A01G361900.1	Wheat	cytosol	49.56	46.8
TraesCS2D01G472300.1	Wheat	cytosol	51.92	46.68
Os04t0625500-00	Rice	plastid	48.67	44.0
Os04t0625400-00	Rice	plastid	42.77	43.94
TraesCS2B01G494600.1	Wheat	cytosol	47.49	43.63
KXG27151	Sorghum	plastid	49.56	43.52
EES11459	Sorghum	plastid	45.13	40.16
TraesCS2D01G471800.1	Wheat	cytosol	46.31	38.01
TraesCS2D01G471700.1	Wheat	cytosol	45.72	37.26
EES11455	Sorghum	cytosol	35.4	37.04
TraesCS2A01G471700.1	Wheat	cytosol	45.43	36.75
TraesCSU01G020200.1	Wheat	cytosol	46.31	36.68
OQU80115	Sorghum	cytosol	37.46	36.29
TraesCS2A01G471800.1	Wheat	mitochondrion	46.9	35.18
KXG24742	Sorghum	mitochondrion	37.17	34.9
EES14743	Sorghum	cytosol, mitochondrion, plastid	36.58	34.44
EES08963	Sorghum	cytosol	38.05	33.95
OQU80118	Sorghum	cytosol	12.09	33.61
EES14736	Sorghum	cytosol	35.1	33.52
KXG24752	Sorghum	cytosol	16.22	33.33
EES14728	Sorghum	cytosol	34.81	33.33
KXG24756	Sorghum	cytosol	34.81	33.24
EES13596	Sorghum	mitochondrion	33.92	33.14
KXG25976	Sorghum	cytosol	11.8	33.06
OQU80150	Sorghum	plastid	33.92	32.95
EER99574	Sorghum	cytosol	35.1	32.6
EES14737	Sorghum	cytosol	33.92	32.39
EER87831	Sorghum	cytosol	33.63	32.2
KXG24755	Sorghum	mitochondrion	35.1	31.65
OQU80119	Sorghum	cytosol	34.51	30.87
EER97813	Sorghum	plastid	36.58	30.85
KXG24747	Sorghum	cytosol	31.86	30.17
EES13585	Sorghum	cytosol, plastid	33.92	29.79
EER99824	Sorghum	plastid	37.17	29.58
EER90755	Sorghum	cytosol	37.17	29.37
KXG34465	Sorghum	cytosol	36.58	28.12
KXG24406	Sorghum	cytosol	33.92	27.38
KXG24338	Sorghum	cytosol	30.09	21.52

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1Z5RF34	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU82373	ProteinID:OQU82373	ProteinID:OQU82373.1	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3006G222000	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B8BB22F	:

Description

hypothetical protein

Coordinates

chr6:+:56854289..56856099

Molecular Weight (calculated)

38149.4 Da

IEP (calculated)

6.070

GRAVY (calculated)

-0.263

Length

339 amino acids

Sequence
(BLAST)

001: MANNSTSPVN HGQCLSDTWS RCVTGTVTAA HTFELTNFSL LEGSMGIGKY VDSSTFSVGG HDWNIRVYPD GWKEDDDDYV SVFLNLERGA VGVRVKYSMS
101: SLDKHGHVSK YMDKCKLQPL LDLNNDCFTI RCDLTVNQDP RTEAVASTIV VPQPNLQQHF EHMLKDGRGT DVTFSVAGEL FRAHRCVLAA RSLVFQAELF
201: GPVKEEATQP IRIDDMEPTI FEALLHFIYT DRCNEDNVTS QHLLTAADQH GVDMLRLTCE VRLCRSIDLL TVGTTLALAE RHHCIQLKDA CLEFIASQDM
301: VGAIMETDGF KHLLTNLPFH HERDLRQDCR RKSRSTLKV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.