CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14736	Sorghum	cytosol	76.62	76.62
TraesCS2D01G059700.1	Wheat	cytosol	23.94	62.5
EES14737	Sorghum	cytosol	60.56	60.56
TraesCS5A01G452100.1	Wheat	cytosol	21.97	60.0
EER99574	Sorghum	cytosol	58.87	57.26
TraesCS5D01G462100.1	Wheat	cytosol	54.93	54.47
KXG24755	Sorghum	mitochondrion	57.46	54.26
TraesCS2B01G074000.1	Wheat	cytosol	52.11	54.09
TraesCS2D01G059500.1	Wheat	cytosol	54.37	53.91
TraesCS5B01G460600.1	Wheat	cytosol	54.37	53.91
TraesCS5A01G451900.1	Wheat	cytosol	54.37	53.76
TraesCS5B01G460400.1	Wheat	cytosol	54.93	53.72
HORVU5Hr1G108760.1	Barley	cytosol	51.55	53.67
TraesCS5B01G472400.1	Wheat	cytosol	41.69	53.43
TraesCS5A01G462000.1	Wheat	cytosol	26.2	53.14
TraesCS3B01G507600.1	Wheat	cytosol	43.38	52.56
TraesCS5A01G451500.1	Wheat	cytosol	53.52	52.34
TraesCS5D01G461700.1	Wheat	cytosol	53.24	52.07
TraesCS5B01G460300.1	Wheat	cytosol	53.24	52.07
TraesCS7D01G148800.1	Wheat	cytosol	51.83	51.69
TraesCS7B01G049700.1	Wheat	cytosol	51.55	51.4
TraesCS5B01G472600.1	Wheat	cytosol	51.27	50.98
TraesCS5A01G451600.1	Wheat	cytosol	49.86	50.72
TraesCS5B01G472100.1	Wheat	cytosol	49.86	50.14
HORVU5Hr1G110530.1	Barley	cytosol	34.93	50.0
TraesCS5B01G472700.1	Wheat	cytosol	49.58	49.86
TraesCS5B01G472500.1	Wheat	cytosol	49.3	49.58
EER87831	Sorghum	cytosol	48.45	48.59
TraesCS5A01G461800.1	Wheat	cytosol	45.92	48.22
KXG24742	Sorghum	mitochondrion	48.17	47.37
HORVU5Hr1G108800.1	Barley	cytosol	45.07	46.92
KXG24747	Sorghum	cytosol	46.48	46.09
OQU80115	Sorghum	cytosol	45.07	45.71
OQU80150	Sorghum	plastid	43.94	44.7
EES14728	Sorghum	cytosol	44.51	44.63
EES13596	Sorghum	mitochondrion	43.38	44.38
OQU80119	Sorghum	cytosol	47.32	44.33
KXG24752	Sorghum	cytosol	20.0	43.03
EES14743	Sorghum	cytosol, mitochondrion, plastid	41.97	41.39
OQU80118	Sorghum	cytosol	13.8	40.16
EES08963	Sorghum	cytosol	42.54	39.74
EES13585	Sorghum	cytosol, plastid	40.28	37.05
OQU82373	Sorghum	cytosol, plastid	33.24	34.81
KXG27151	Sorghum	plastid	37.46	34.46
EES11455	Sorghum	cytosol	28.73	31.48
EER99824	Sorghum	plastid	37.75	31.46
OQU82372	Sorghum	plastid	30.14	31.38
KXG24406	Sorghum	cytosol	36.62	30.95
EER97813	Sorghum	plastid	33.8	29.85
EER90755	Sorghum	cytosol	36.06	29.84
EES11459	Sorghum	plastid	31.27	29.13
KXG34465	Sorghum	cytosol	35.77	28.8
KXG25976	Sorghum	cytosol	9.58	28.1
KXG24338	Sorghum	cytosol	34.37	25.74

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PGE0	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG24756	ProteinID:KXG24756	ProteinID:KXG24756.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G082000	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00081AD4BA

Description

hypothetical protein

Coordinates

chr7:-:9727705..9729375

Molecular Weight (calculated)

39633.6 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.052

Length

355 amino acids

Sequence
(BLAST)

001: MTMPTAVCTC TAKTDQCMFV FEIFDYSQHR SMRTGEFIRS STFSVGGYDW AICFYPSREQ NDWGYITVYL ELLSVNTKVW ASCDLRLVDQ TTGLSTSLHK
101: TELRVFNSSN ASRFAPQTGS FMNRSQFDAS LYLKDDHLTI QCITTVKQLQ VSAPELLNEI EVPLSNSAVL LGKLLETGEG ADVTFSVGGQ TFTAHKIVLA
201: MRSPVFKAEL FGQIKEANEQ LVTIQDMKPD VFRALLYFIY TDSLRGMDGQ DGEGKRGMIR HLLVAADRYA VERMKLVCAS ILCKNLDAKN VSATLALAYQ
301: HNCDKLKDVC LEFITSSSSV MDSVVATQGF QNLKATCPSA LVDAFEKLSK RFRKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.