CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14736	Sorghum	cytosol	61.13	61.13
KXG24756	Sorghum	cytosol	60.56	60.56
TraesCS2D01G059700.1	Wheat	cytosol	22.82	59.56
EER99574	Sorghum	cytosol	59.72	58.08
TraesCS5A01G452100.1	Wheat	cytosol	20.85	56.92
TraesCS2D01G059500.1	Wheat	cytosol	56.9	56.42
TraesCS5A01G462000.1	Wheat	cytosol	27.61	56.0
HORVU5Hr1G108760.1	Barley	cytosol	53.52	55.72
TraesCS5B01G460400.1	Wheat	cytosol	56.62	55.37
TraesCS2B01G074000.1	Wheat	cytosol	52.96	54.97
TraesCS5D01G462100.1	Wheat	cytosol	55.21	54.75
KXG24755	Sorghum	mitochondrion	57.75	54.52
TraesCS5B01G472400.1	Wheat	cytosol	42.25	54.15
TraesCS7B01G049700.1	Wheat	cytosol	54.08	53.93
TraesCS3B01G507600.1	Wheat	cytosol	44.23	53.58
TraesCS5B01G472500.1	Wheat	cytosol	53.24	53.54
TraesCS5D01G461700.1	Wheat	cytosol	54.65	53.44
TraesCS5B01G472700.1	Wheat	cytosol	52.68	52.97
TraesCS5A01G451900.1	Wheat	cytosol	53.52	52.92
TraesCS5B01G460300.1	Wheat	cytosol	54.08	52.89
TraesCS5A01G451500.1	Wheat	cytosol	54.08	52.89
TraesCS5B01G460600.1	Wheat	cytosol	53.24	52.79
TraesCS5B01G472600.1	Wheat	cytosol	52.96	52.66
TraesCS7D01G148800.1	Wheat	cytosol	52.68	52.53
TraesCS5B01G472100.1	Wheat	cytosol	52.11	52.41
TraesCS5A01G451600.1	Wheat	cytosol	50.7	51.58
TraesCS5A01G461800.1	Wheat	cytosol	48.73	51.18
HORVU5Hr1G108800.1	Barley	cytosol	48.45	50.44
HORVU5Hr1G110530.1	Barley	cytosol	35.21	50.4
EER87831	Sorghum	cytosol	49.86	50.0
KXG24742	Sorghum	mitochondrion	49.3	48.48
EES14728	Sorghum	cytosol	47.89	48.02
KXG24747	Sorghum	cytosol	48.17	47.77
KXG24752	Sorghum	cytosol	21.97	47.27
OQU80119	Sorghum	cytosol	49.58	46.44
OQU80115	Sorghum	cytosol	45.63	46.29
OQU80118	Sorghum	cytosol	15.77	45.9
OQU80150	Sorghum	plastid	43.1	43.84
EES14743	Sorghum	cytosol, mitochondrion, plastid	42.25	41.67
EES13585	Sorghum	cytosol, plastid	45.07	41.45
EES13596	Sorghum	mitochondrion	40.28	41.21
EES08963	Sorghum	cytosol	43.38	40.53
KXG27151	Sorghum	plastid	36.9	33.94
OQU82373	Sorghum	cytosol, plastid	32.39	33.92
OQU82372	Sorghum	plastid	31.27	32.55
EES11459	Sorghum	plastid	33.8	31.5
EES11455	Sorghum	cytosol	28.45	31.17
KXG25976	Sorghum	cytosol	10.42	30.58
EER97813	Sorghum	plastid	34.37	30.35
KXG24406	Sorghum	cytosol	35.49	30.0
EER99824	Sorghum	plastid	35.77	29.81
EER90755	Sorghum	cytosol	34.65	28.67
KXG34465	Sorghum	cytosol	35.49	28.57
KXG24338	Sorghum	cytosol	34.08	25.53

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8086071	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5YJ12	EnsemblPlants:EES14737	ProteinID:EES14737	ProteinID:EES14737.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3007G082300	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0001A87E5C	RefSeq:XP_002445242.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9746464..9747531

Molecular Weight (calculated)

39703.1 Da

IEP (calculated)

7.695

GRAVY (calculated)

-0.072

Length

355 amino acids

Sequence
(BLAST)

001: MSTPTKVSTC TADTEQGKHV FKIFDYSQHK GMGQKMLIRS GTFTVGGHDW SVLFYPDGYS LASIDCISVY VELLGKERMV WASCDLRLVN HTTGLPSFVH
101: KTDLRMFNSA DFSRFAPQTG MFMNRSKFES SAYLQNDSLT IECNINVKKA PRVSATRLLN KIEVPPSNIT VQLGKLLDAE EGKDVTFIVG GETFAAHKIL
201: LAMRSPVFKA QLYGPMSEAK AEHVTIQDMQ PAVFRTLLHF IYTDSLPLDY HGGGTYNCEM IWHLLEAADR YAVDRLSLVC QSILCKNLDV ENVSTTLVLA
301: CQHGCNRLKD DCLEFITSKS VMDAVVATQS YKNLKIAYPS VLLEVLEKKM KSCKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.