CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227400-00	Rice	cytosol	39.83	61.84
KXG24747	Sorghum	cytosol	57.06	56.42
EER99574	Sorghum	cytosol	54.24	52.6
EES14737	Sorghum	cytosol	50.0	49.86
KXG24742	Sorghum	mitochondrion	50.56	49.58
OQU80115	Sorghum	cytosol	48.31	48.86
KXG24752	Sorghum	cytosol	22.6	48.48
KXG24756	Sorghum	cytosol	48.59	48.45
EES14736	Sorghum	cytosol	48.59	48.45
KXG24755	Sorghum	mitochondrion	50.85	47.87
OQU80119	Sorghum	cytosol	51.13	47.76
EES14743	Sorghum	cytosol, mitochondrion, plastid	47.74	46.94
OQU80118	Sorghum	cytosol	16.1	46.72
EES14728	Sorghum	cytosol	46.61	46.61
OQU80150	Sorghum	plastid	45.76	46.42
EES13596	Sorghum	mitochondrion	44.07	44.96
EES13585	Sorghum	cytosol, plastid	43.22	39.64
EES08963	Sorghum	cytosol	38.42	35.79
KXG27151	Sorghum	plastid	38.7	35.49
EES11455	Sorghum	cytosol	31.07	33.95
OQU82373	Sorghum	cytosol, plastid	32.2	33.63
EER99824	Sorghum	plastid	38.14	31.69
OQU82372	Sorghum	plastid	29.94	31.09
EES11459	Sorghum	plastid	32.77	30.45
EER97813	Sorghum	plastid	34.46	30.35
KXG24406	Sorghum	cytosol	35.88	30.24
Os08t0227500-00	Rice	nucleus, plastid	5.93	29.58
KXG25976	Sorghum	cytosol	9.89	28.93
EER90755	Sorghum	cytosol	34.75	28.67
KXG34465	Sorghum	cytosol	33.62	26.98
KXG24338	Sorghum	cytosol	34.18	25.53

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8068767	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5Z3W5	EnsemblPlants:EER87831	ProteinID:EER87831	ProteinID:EER87831.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3010G034500	SUPFAM:SSF49599	SUPFAM:SSF54695	unigene:Sbi.2794	InterPro:TRAF-like
UniParc:UPI0001A88F88	RefSeq:XP_002436464.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:2794302..2796082

Molecular Weight (calculated)

39222.2 Da

IEP (calculated)

5.243

GRAVY (calculated)

-0.020

Length

354 amino acids

Sequence
(BLAST)

001: MPASKTVSTS AAETDLGTHV FHVVGYSHQK AICAHKDTSI LSGRFSVGGH EWALVLVADI YNDDHPDCVA ISLLLDPFAA PGVLASFELR LVNQSTGLPF
101: TVHKEAPMVF DDNNDMAATC WIKRSLLESP TYLQNDRLTV ECIVTVIKER LVSKTKSLPR IEVPPPNMAE NFGSLLETDL GADVTFSVGD ETFKAHKIVL
201: ATRSPVFKAE LYGPMKEEGM KPITIKDMQP DVFRALLRFI YTDSLPPLDD LEADDHSEMI RHLLVAADRY AIERLKLICQ SFLCENLNVQ TVATTLALAD
301: QHNCDILKDA CIDFITCSNE MDGLLSSQGY KNLKRTCPAV VIDVFEKTSK FRKA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.