CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G084920.2	Barley	cytosol	51.3	74.72
TraesCS2D01G472400.1	Wheat	cytosol	68.91	73.08
TraesCS2B01G495400.1	Wheat	cytosol	68.65	72.8
TraesCS2A01G472700.1	Wheat	cytosol	68.39	72.53
Os04t0625600-01	Rice	cytosol	68.39	67.69
HORVU2Hr1G106750.2	Barley	plastid	68.39	55.7
OQU82372	Sorghum	plastid	44.56	50.44
OQU82373	Sorghum	cytosol, plastid	43.52	49.56
OQU80115	Sorghum	cytosol	39.64	43.71
KXG24752	Sorghum	cytosol	18.39	43.03
EES11455	Sorghum	cytosol	35.23	41.98
EES11459	Sorghum	plastid	41.19	41.73
OQU80118	Sorghum	cytosol	12.44	39.34
EES14728	Sorghum	cytosol	35.49	38.7
EER87831	Sorghum	cytosol	35.49	38.7
EES14743	Sorghum	cytosol, mitochondrion, plastid	35.75	38.33
EES14736	Sorghum	cytosol	35.23	38.31
KXG24756	Sorghum	cytosol	34.46	37.46
EES13596	Sorghum	mitochondrion	33.42	37.18
KXG24747	Sorghum	cytosol	34.46	37.15
KXG24742	Sorghum	mitochondrion	34.72	37.12
EES14737	Sorghum	cytosol	33.94	36.9
EER99574	Sorghum	cytosol	34.72	36.71
EES08963	Sorghum	cytosol	36.01	36.58
OQU80150	Sorghum	plastid	32.9	36.39
KXG24755	Sorghum	mitochondrion	35.23	36.17
OQU80119	Sorghum	cytosol	34.72	35.36
EES13585	Sorghum	cytosol, plastid	34.72	34.72
KXG25976	Sorghum	cytosol	10.88	34.71
EER99824	Sorghum	plastid	38.08	34.51
EER97813	Sorghum	plastid	35.49	34.08
EER90755	Sorghum	cytosol	35.75	32.17
KXG34465	Sorghum	cytosol	36.53	31.97
KXG24406	Sorghum	cytosol	29.79	27.38
KXG24338	Sorghum	cytosol	29.53	24.05

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PN99	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG27151	ProteinID:KXG27151	ProteinID:KXG27151.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PFscan:PS51257	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3006G222300	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI00081AC077	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56868037..56876628

Molecular Weight (calculated)

42819.2 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.152

Length

386 amino acids

Sequence
(BLAST)

001: MDARSVPGPP QRPTPSAPLP AGCSCLPKTS STSLTKSFTA VHDFRVSDYS LLEGMGFGRY VTSSTFSVGG HDWAVRFYPD GATAGLLGDV SAFLYYYSRD
101: LDAPGVRTRF TLNLLERDGK MPQVTNPYMK HTFSPVSDNW GFTKFMEKSR LQQGSPYLDR DCLTIRCVLT VVIESRTMAN ETNSIAVPPS SLHQDFGEML
201: SDGEGADVTF TVDGQLFRAH RCVLAFRSPV FRAELFGPMK EKAENRIRID DMEPAIFEAL LQFIYTDRLP DSCSDGRNPA ITHLLVAADR YGVERLRLLC
301: ESKLSEAIDV ETVATTLALA EQHNCSQLRR ACIGFMASPN MLGPIMETDG FNHLIASCPL VMKEILDKVS CIWSVTSVSW QMTQKN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.