CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24756	Sorghum	cytosol	76.62	76.62
TraesCS2D01G059700.1	Wheat	cytosol	24.23	63.24
EES14737	Sorghum	cytosol	61.13	61.13
TraesCS5A01G462000.1	Wheat	cytosol	29.3	59.43
TraesCS5A01G452100.1	Wheat	cytosol	21.69	59.23
EER99574	Sorghum	cytosol	60.0	58.36
TraesCS5B01G472400.1	Wheat	cytosol	43.94	56.32
HORVU5Hr1G108760.1	Barley	cytosol	53.52	55.72
TraesCS5D01G462100.1	Wheat	cytosol	56.06	55.59
KXG24755	Sorghum	mitochondrion	58.87	55.59
TraesCS5B01G460600.1	Wheat	cytosol	55.49	55.03
TraesCS2B01G074000.1	Wheat	cytosol	52.68	54.68
TraesCS5B01G460400.1	Wheat	cytosol	55.77	54.55
TraesCS7D01G148800.1	Wheat	cytosol	54.65	54.49
TraesCS5A01G451900.1	Wheat	cytosol	54.93	54.32
TraesCS5D01G461700.1	Wheat	cytosol	55.49	54.27
TraesCS2D01G059500.1	Wheat	cytosol	54.65	54.19
TraesCS5B01G472600.1	Wheat	cytosol	54.08	53.78
TraesCS7B01G049700.1	Wheat	cytosol	53.8	53.65
HORVU5Hr1G110530.1	Barley	cytosol	37.46	53.63
TraesCS5B01G472700.1	Wheat	cytosol	53.24	53.54
TraesCS5A01G451500.1	Wheat	cytosol	54.37	53.17
TraesCS5B01G472100.1	Wheat	cytosol	52.68	52.97
TraesCS5B01G460300.1	Wheat	cytosol	54.08	52.89
TraesCS5A01G461800.1	Wheat	cytosol	50.14	52.66
TraesCS5B01G472500.1	Wheat	cytosol	52.11	52.41
TraesCS3B01G507600.1	Wheat	cytosol	42.54	51.54
TraesCS5A01G451600.1	Wheat	cytosol	50.42	51.29
HORVU5Hr1G108800.1	Barley	cytosol	47.89	49.85
KXG24742	Sorghum	mitochondrion	50.42	49.58
EER87831	Sorghum	cytosol	48.45	48.59
EES14728	Sorghum	cytosol	47.89	48.02
OQU80115	Sorghum	cytosol	46.2	46.86
KXG24752	Sorghum	cytosol	21.69	46.67
KXG24747	Sorghum	cytosol	46.48	46.09
OQU80119	Sorghum	cytosol	47.89	44.85
OQU80150	Sorghum	plastid	43.66	44.41
OQU80118	Sorghum	cytosol	15.21	44.26
EES13596	Sorghum	mitochondrion	42.82	43.8
EES14743	Sorghum	cytosol, mitochondrion, plastid	43.38	42.78
EES08963	Sorghum	cytosol	43.66	40.79
EES13585	Sorghum	cytosol, plastid	42.25	38.86
KXG27151	Sorghum	plastid	38.31	35.23
OQU82372	Sorghum	plastid	33.8	35.19
OQU82373	Sorghum	cytosol, plastid	33.52	35.1
EES11455	Sorghum	cytosol	30.99	33.95
KXG25976	Sorghum	cytosol	11.27	33.06
EER99824	Sorghum	plastid	38.87	32.39
EER97813	Sorghum	plastid	35.49	31.34
KXG24406	Sorghum	cytosol	36.34	30.71
KXG34465	Sorghum	cytosol	38.03	30.61
EER90755	Sorghum	cytosol	36.9	30.54
EES11459	Sorghum	plastid	32.68	30.45
KXG24338	Sorghum	cytosol	32.96	24.68

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8086070	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5YJ11	EnsemblPlants:EES14736	ProteinID:EES14736	ProteinID:EES14736.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G082100	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A87E5B
RefSeq:XP_002445241.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9731202..9732718

Molecular Weight (calculated)

39863.0 Da

IEP (calculated)

7.450

GRAVY (calculated)

-0.117

Length

355 amino acids

Sequence
(BLAST)

001: MRTAVSTFAA KTEQCMLVFE ISDYRLHKGM GIGEFIRSGT FTVGGYDWAI CFYPDGDVNS AGYISVYLEL LSKDTKVWAS CDLRLVDQIT RLSTSVNRTE
101: LRVFKSGDTI SRRAPYNGTF ICRSQFEASS YLKDDHFTIH CITTVRQPHV SGPELLNKIQ VPPSRITELL GKLLDEGEGA DVTFRVGGET FAAHKIVLAM
201: RSPVFKAELF GQMKEAREQL VTIQDMQPDV FRALLYFIYT DSLPADMDVR DGEGYREMIR HLLVAADRYA VDRMKLVCAS ILCKNLHPKT VSATLALAYH
301: HNCDRLKDVC LEFITSSSDV MNSVMATQGY QNLKATCPSA LVDAFEKSSK KFQKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.