Factsheet for TraesCS5D01G462100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G460600.1	Wheat	cytosol	92.46	92.46
TraesCS5A01G451900.1	Wheat	cytosol	88.27	88.02
HORVU5Hr1G108760.1	Barley	cytosol	78.77	82.7
TraesCS5D01G461700.1	Wheat	cytosol	76.82	75.76
HORVU5Hr1G108800.1	Barley	cytosol	70.39	73.9
TraesCS2D01G059700.1	Wheat	cytosol	27.37	72.06
TraesCS5D01G474700.1	Wheat	cytosol	46.65	71.67
Os08t0227400-00	Rice	cytosol	40.5	63.6
TraesCS2D01G059500.1	Wheat	cytosol	63.41	63.41
EER99574	Sorghum	cytosol	59.22	58.08
KXG24755	Sorghum	mitochondrion	60.89	57.98
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	24.58	56.77
TraesCS7D01G148800.1	Wheat	cytosol	56.42	56.74
EES14736	Sorghum	cytosol	55.59	56.06
EES14737	Sorghum	cytosol	54.75	55.21
TraesCS5D01G047900.1	Wheat	cytosol	21.51	55.0
KXG24756	Sorghum	cytosol	54.47	54.93
TraesCS2D01G363000.1	Wheat	mitochondrion	53.07	51.91
TraesCS2D01G544500.1	Wheat	cytosol, plastid	42.46	51.18
TraesCS7D01G024000.1	Wheat	mitochondrion	49.72	49.86
TraesCS3D01G352200.1	Wheat	cytosol	40.5	49.15
TraesCS2D01G544700.1	Wheat	cytosol	44.41	48.92
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	47.49	48.85
TraesCS3D01G177000.1	Wheat	cytosol	46.37	48.26
TraesCS2D01G458900.1	Wheat	extracellular	19.83	47.97
TraesCS2D01G363600.1	Wheat	cytosol	48.04	47.51
TraesCS5D01G048000.1	Wheat	cytosol	45.25	47.23
TraesCS6D01G256000.1	Wheat	cytosol	50.0	46.49
TraesCS2D01G415300.1	Wheat	cytosol	47.77	46.22
TraesCS7D01G501200.1	Wheat	cytosol	47.77	46.09
TraesCS2D01G544900.1	Wheat	plastid	36.03	46.07
TraesCS3D01G026900.1	Wheat	cytosol	46.37	45.73
TraesCS6D01G156500.1	Wheat	plastid	42.18	45.21
TraesCS7D01G500400.1	Wheat	cytosol	46.09	44.96
TraesCS5D01G048300.1	Wheat	plastid	44.13	44.76
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	29.61	44.73
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	43.3	44.54
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	42.74	44.09
TraesCS3D01G214900.1	Wheat	cytosol	30.45	43.78
TraesCS7D01G307900.1	Wheat	cytosol, plastid	43.3	42.35
TraesCS7D01G308000.1	Wheat	cytosol	41.62	41.74
TraesCS7D01G501100.1	Wheat	plastid	33.24	40.89
TraesCS3D01G310900.1	Wheat	cytosol	31.28	39.3
TraesCS2D01G472200.1	Wheat	cytosol	37.15	39.12
TraesCS7D01G537000.1	Wheat	cytosol	30.73	39.01
TraesCS3D01G026500.1	Wheat	mitochondrion	41.62	38.7
TraesCS4D01G353300.1	Wheat	cytosol	37.71	37.71
TraesCS2D01G472400.1	Wheat	cytosol	37.99	37.36
TraesCS3D01G513100.1	Wheat	cytosol, plastid	36.59	37.11
TraesCS5D01G047800.1	Wheat	peroxisome	38.27	36.53
TraesCS2D01G472300.1	Wheat	cytosol	37.71	35.81
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	42.46	35.76
TraesCS7D01G307800.1	Wheat	cytosol	31.56	35.2
TraesCS5D01G370700.1	Wheat	cytosol	27.09	34.89
TraesCS2D01G469800.1	Wheat	plastid	34.36	34.45
TraesCS4D01G197600.1	Wheat	cytosol	33.52	34.19
TraesCS2D01G470700.1	Wheat	cytosol	33.8	33.52
TraesCS2D01G266900.1	Wheat	cytosol	36.31	32.83
Os08t0227500-00	Rice	nucleus, plastid	6.42	32.39
TraesCS2D01G246900.1	Wheat	cytosol, plastid	38.27	32.16
TraesCS2D01G471800.1	Wheat	cytosol	36.87	31.96
TraesCS5D01G437400.1	Wheat	cytosol	38.27	29.72
TraesCS2D01G471700.1	Wheat	cytosol	31.28	26.92

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5D01G462100	EnsemblPlants:TraesCS5D01G462100.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:505934537..505935613

Molecular Weight (calculated)

39863.0 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.253

Length

358 amino acids

Sequence
(BLAST)

001: MGACRTASTC SPDEAQGMHV FDILGYSKHM GMGKDPDSFI RSRIFTVGGH DWAIRFYPDG YGKACPDYIS VYLELMSNST KVRASCDLRL VDHCTGSSSS
101: VHKTGPRIFN SGDATKFAPP HSSFKKRNEI EGSTYLRDDR LTIECMVTVI KKPHVADTKP LPKIDMPPSD MTAHVGRLLE EKEGFDVSFI VGEETIDAHR
201: FVLAMRSPVL KAELYGPMRE ARPGQCITIK DMQPAVFKAL LHFIYTDSLP GDMDLEGDED TDMVRLLLVA ADRYAMERLK LVCQSILCDD LNADTVATTL
301: ALADQHNCHK LKDACLEFME MSDDMDAVVA TQGFKDVKAT CPSLIVDALE KRRKFRKA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.