Factsheet for TraesCS5D01G474700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G462100.1	Wheat	cytosol	71.67	46.65
TraesCS5D01G461700.1	Wheat	cytosol	69.1	44.35
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	42.06	41.35
TraesCS2D01G059500.1	Wheat	cytosol	58.8	38.27
TraesCS3D01G214900.1	Wheat	cytosol	40.77	38.15
TraesCS7D01G148800.1	Wheat	cytosol	48.07	31.46
TraesCS2D01G544500.1	Wheat	cytosol, plastid	39.06	30.64
TraesCS2D01G544700.1	Wheat	cytosol	41.63	29.85
TraesCS3D01G310900.1	Wheat	cytosol	36.48	29.82
TraesCS7D01G501100.1	Wheat	plastid	36.48	29.21
TraesCS2D01G363000.1	Wheat	mitochondrion	45.06	28.69
TraesCS6D01G156500.1	Wheat	plastid	40.77	28.44
TraesCS3D01G177000.1	Wheat	cytosol	39.91	27.03
TraesCS5D01G370700.1	Wheat	cytosol	32.19	26.98
TraesCS7D01G308000.1	Wheat	cytosol	40.77	26.61
TraesCS2D01G415300.1	Wheat	cytosol	42.06	26.49
TraesCS7D01G024000.1	Wheat	mitochondrion	39.91	26.05
TraesCS2D01G363600.1	Wheat	cytosol	40.34	25.97
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	38.63	25.86
TraesCS3D01G026900.1	Wheat	cytosol	38.63	24.79
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	36.91	24.71
TraesCS7D01G501200.1	Wheat	cytosol	39.06	24.53
TraesCS5D01G048000.1	Wheat	cytosol	36.05	24.49
TraesCS6D01G256000.1	Wheat	cytosol	40.34	24.42
TraesCS5D01G048300.1	Wheat	plastid	36.91	24.36
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	36.05	24.21
Zm00001d024349_P001	Maize	cytosol	36.91	23.96
TraesCS2D01G544900.1	Wheat	plastid	28.33	23.57
TraesCS7D01G307900.1	Wheat	cytosol, plastid	36.91	23.5
TraesCS7D01G500400.1	Wheat	cytosol	36.91	23.43
TraesCS3D01G352200.1	Wheat	cytosol	29.61	23.39
TraesCS2D01G472200.1	Wheat	cytosol	32.62	22.35
TraesCS2D01G472400.1	Wheat	cytosol	34.33	21.98
TraesCS3D01G513100.1	Wheat	cytosol, plastid	32.19	21.25
TraesCS4D01G353300.1	Wheat	cytosol	32.62	21.23
TraesCS4D01G197600.1	Wheat	cytosol	31.33	20.8
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	36.91	20.24
TraesCS2D01G469800.1	Wheat	plastid	30.9	20.17
TraesCS7D01G307800.1	Wheat	cytosol	27.47	19.94
TraesCS2D01G472300.1	Wheat	cytosol	31.76	19.63
TraesCS2D01G470700.1	Wheat	cytosol	30.04	19.39
TraesCS3D01G026500.1	Wheat	mitochondrion	30.9	18.7
TraesCS2D01G246900.1	Wheat	cytosol, plastid	33.91	18.54
TraesCS2D01G471800.1	Wheat	cytosol	31.76	17.92
TraesCS2D01G266900.1	Wheat	cytosol	30.04	17.68
TraesCS5D01G047800.1	Wheat	peroxisome	28.33	17.6
TraesCS7D01G537000.1	Wheat	cytosol	21.03	17.38
TraesCS5D01G437400.1	Wheat	cytosol	33.91	17.14
TraesCS2D01G471700.1	Wheat	cytosol	28.33	15.87
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	5.58	8.39
TraesCS2D01G059700.1	Wheat	cytosol	3.86	6.62
TraesCS5D01G047900.1	Wheat	cytosol	3.0	5.0
OQU80118	Sorghum	cytosol	0.43	0.82
TraesCS2D01G458900.1	Wheat	extracellular	0.43	0.68

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5D01G474700	EnsemblPlants:TraesCS5D01G474700.1	TIGR:cd00121

Description

No Description!

Coordinates

chr5D:+:514515231..514515932

Molecular Weight (calculated)

26206.5 Da

IEP (calculated)

7.822

GRAVY (calculated)

-0.230

Length

233 amino acids

Sequence
(BLAST)

001: MKTCKTVSTC TPLEEAQGTH MFDILGYSKH RGMGHDRDSY IRSGFFTVGG HNWAISFFPD GFSGYGQDYI SVYLVLVSHR TKVRASCDMR LVDQYTGCSF
101: SVHNIGPRIF NPADTTRVAP QTPCFIRRDE IEGSAYLRDD RLTIECVVTV FKKPHVSETK PFRVIDMPPA DMTEHVAKLL EEKKGFDVSF IVGGGTIEAH
201: RFVLAMQSPV FKAELYGSMR EARPGQCITI KDM

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.