Factsheet for TraesCS6D01G156500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G167500.1	Wheat	plastid	97.6	97.6
HORVU6Hr1G034020.1	Barley	plastid	69.76	91.02
TraesCS2D01G544500.1	Wheat	cytosol, plastid	38.92	43.77
TraesCS2D01G544700.1	Wheat	cytosol	42.22	43.38
TraesCS5D01G462100.1	Wheat	cytosol	45.21	42.18
TraesCS5D01G474700.1	Wheat	cytosol	28.44	40.77
TraesCS2D01G059500.1	Wheat	cytosol	43.41	40.5
TraesCS5D01G461700.1	Wheat	cytosol	44.01	40.5
TraesCS2D01G363000.1	Wheat	mitochondrion	44.01	40.16
OQU80118	Sorghum	cytosol	14.37	39.34
TraesCS3D01G177000.1	Wheat	cytosol	39.82	38.66
TraesCS7D01G148800.1	Wheat	cytosol	41.02	38.48
TraesCS3D01G352200.1	Wheat	cytosol	33.53	37.97
TraesCS3D01G026900.1	Wheat	cytosol	40.72	37.47
TraesCS7D01G024000.1	Wheat	mitochondrion	39.82	37.25
TraesCS2D01G458900.1	Wheat	extracellular	16.47	37.16
TraesCS2D01G544900.1	Wheat	plastid	31.14	37.14
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	38.32	36.89
TraesCS2D01G415300.1	Wheat	cytosol	40.42	36.49
TraesCS7D01G501200.1	Wheat	cytosol	40.42	36.39
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	37.72	36.21
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	37.72	36.21
TraesCS5D01G048300.1	Wheat	plastid	38.02	35.98
TraesCS2D01G363600.1	Wheat	cytosol	38.92	35.91
TraesCS5D01G048000.1	Wheat	cytosol	36.83	35.86
TraesCS2D01G059700.1	Wheat	cytosol	14.37	35.29
Zm00001d024349_P001	Maize	cytosol	36.83	34.26
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	15.87	34.19
TraesCS3D01G214900.1	Wheat	cytosol	25.45	34.14
TraesCS7D01G308000.1	Wheat	cytosol	35.93	33.61
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	23.65	33.33
TraesCS7D01G501100.1	Wheat	plastid	29.04	33.33
TraesCS4D01G353300.1	Wheat	cytosol	35.63	33.24
TraesCS2D01G472200.1	Wheat	cytosol	33.83	33.24
TraesCS7D01G500400.1	Wheat	cytosol	36.23	32.97
TraesCS3D01G513100.1	Wheat	cytosol, plastid	34.73	32.86
TraesCS5D01G047900.1	Wheat	cytosol	13.77	32.86
TraesCS7D01G537000.1	Wheat	cytosol	27.54	32.62
TraesCS5D01G370700.1	Wheat	cytosol	26.95	32.37
TraesCS3D01G310900.1	Wheat	cytosol	27.54	32.28
TraesCS6D01G256000.1	Wheat	cytosol	37.13	32.21
TraesCS2D01G472400.1	Wheat	cytosol	34.73	31.87
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.43	31.42
TraesCS4D01G197600.1	Wheat	cytosol	32.63	31.05
TraesCS2D01G470700.1	Wheat	cytosol	33.53	31.02
TraesCS2D01G472300.1	Wheat	cytosol	34.43	30.5
TraesCS5D01G047800.1	Wheat	peroxisome	34.13	30.4
TraesCS7D01G307800.1	Wheat	cytosol	29.04	30.22
TraesCS3D01G026500.1	Wheat	mitochondrion	34.43	29.87
TraesCS2D01G469800.1	Wheat	plastid	30.54	28.57
TraesCS2D01G266900.1	Wheat	cytosol	33.23	28.03
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	35.63	28.0
TraesCS2D01G471800.1	Wheat	cytosol	33.53	27.12
TraesCS2D01G471700.1	Wheat	cytosol	33.23	26.68
TraesCS2D01G246900.1	Wheat	cytosol, plastid	32.04	25.12
TraesCS5D01G437400.1	Wheat	cytosol	33.23	24.08

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR44756	PANTHER:PTHR44756:SF1
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS6D01G156500
EnsemblPlants:TraesCS6D01G156500.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr6D:-:132756940..132757944

Molecular Weight (calculated)

36485.9 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.014

Length

334 amino acids

Sequence
(BLAST)

001: MPASSAKTVL ETAASTSTCT PETVQRKHVF DIRGYSQHKL LGPNVYISSG AFAVGGFDWN IRYYPCGYLK PKYVSVYLEL LSAGARVRAS CDLTVVGQRP
101: GAPSLVSRTP PTLFTSDLSR FAPSTSKFVK RSKLESPSWG LVHGDRLVIE CVVTVFMYPT VVTWAAAPDE GDPPSDLHRD LARMYESQAG ADVGFLVGGQ
201: GFRAHRTVLA MRAPAFMAGV VRGGGLGFSS GCVDINDMQP EAFDALLYYI YMDSLPAAIR DVDGDRKREL VMDLLAAADR YDIQRLKLIC ETALSKTLEA
301: NTVVTTLTLA EKHHCQRLRQ ACVQFIASSV DQIK

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.