Factsheet for TraesCS3D01G352200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G047900.1	Wheat	cytosol	32.54	68.57
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	30.17	57.42
TraesCS2D01G059700.1	Wheat	cytosol	26.44	57.35
TraesCS2D01G458900.1	Wheat	extracellular	25.42	50.68
TraesCS5D01G048000.1	Wheat	cytosol	56.95	48.98
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	55.25	46.97
TraesCS2D01G363000.1	Wheat	mitochondrion	57.97	46.72
TraesCS5D01G048300.1	Wheat	plastid	55.59	46.46
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	53.9	45.69
TraesCS7D01G024000.1	Wheat	mitochondrion	55.25	45.66
TraesCS3D01G026900.1	Wheat	cytosol	55.59	45.18
EES14743	Sorghum	cytosol, mitochondrion, plastid	54.24	44.44
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	51.53	43.68
TraesCS2D01G363600.1	Wheat	cytosol	53.56	43.65
TraesCS7D01G501200.1	Wheat	cytosol	52.88	42.05
TraesCS3D01G177000.1	Wheat	cytosol	48.81	41.86
TraesCS3D01G026500.1	Wheat	mitochondrion	54.24	41.56
TraesCS7D01G537000.1	Wheat	cytosol	39.66	41.49
TraesCS2D01G544500.1	Wheat	cytosol, plastid	41.02	40.74
TraesCS5D01G462100.1	Wheat	cytosol	49.15	40.5
TraesCS7D01G500400.1	Wheat	cytosol	50.17	40.33
TraesCS2D01G415300.1	Wheat	cytosol	50.17	40.0
TraesCS7D01G148800.1	Wheat	cytosol	47.46	39.33
TraesCS5D01G461700.1	Wheat	cytosol	48.14	39.12
TraesCS2D01G059500.1	Wheat	cytosol	47.46	39.11
TraesCS2D01G544700.1	Wheat	cytosol	42.37	38.46
TraesCS5D01G047800.1	Wheat	peroxisome	48.47	38.13
TraesCS6D01G256000.1	Wheat	cytosol	49.49	37.92
TraesCS2D01G544900.1	Wheat	plastid	35.59	37.5
TraesCS7D01G308000.1	Wheat	cytosol	43.05	35.57
TraesCS7D01G307900.1	Wheat	cytosol, plastid	41.69	33.61
TraesCS6D01G156500.1	Wheat	plastid	37.97	33.53
TraesCS7D01G501100.1	Wheat	plastid	32.54	32.99
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	26.1	32.49
TraesCS3D01G310900.1	Wheat	cytosol	30.85	31.93
TraesCS2D01G469800.1	Wheat	plastid	38.31	31.65
TraesCS3D01G513100.1	Wheat	cytosol, plastid	37.63	31.44
TraesCS4D01G353300.1	Wheat	cytosol	37.97	31.28
TraesCS2D01G472200.1	Wheat	cytosol	35.93	31.18
TraesCS3D01G214900.1	Wheat	cytosol	25.76	30.52
TraesCS2D01G472300.1	Wheat	cytosol	38.98	30.5
TraesCS2D01G472400.1	Wheat	cytosol	36.61	29.67
TraesCS5D01G474700.1	Wheat	cytosol	23.39	29.61
TraesCS2D01G470700.1	Wheat	cytosol	35.25	28.81
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	41.02	28.47
TraesCS2D01G266900.1	Wheat	cytosol	37.63	28.03
TraesCS7D01G307800.1	Wheat	cytosol	30.17	27.73
TraesCS5D01G370700.1	Wheat	cytosol	26.1	27.7
TraesCS2D01G246900.1	Wheat	cytosol, plastid	38.98	27.0
TraesCS4D01G197600.1	Wheat	cytosol	31.53	26.5
TraesCS2D01G471800.1	Wheat	cytosol	35.59	25.42
TraesCS5D01G437400.1	Wheat	cytosol	38.64	24.73
TraesCS2D01G471700.1	Wheat	cytosol	30.85	21.88

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3D01G352200
EnsemblPlants:TraesCS3D01G352200.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr3D:+:463176665..463177552

Molecular Weight (calculated)

33327.6 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.045

Length

295 amino acids

Sequence
(BLAST)

001: MYEHQEYVSV FLELLTLEAD VRAGFDMSLV VPSDPATTKL IHRVAPMFFG HIQPDWGLPK FMKRAVLESS PYLEDDRLVI KCEVTVVRQP QVEETSPDFE
101: VQVPPSDLYD NLGKLLESGE EADVIFKVKR ESFSAHKIVL AMRSPVFKVE LYGPMSDKRT GRITVKDMQP AVFKALLQFI YTDSLPSMLD LCDNDQKEMV
201: KHLLVAADKY AMERLKLICE GILCRSLDVD SVATTLALAD QHHCGNLKNA CVQFILTANR MDAVLASKGY THLKRSCPSV IVDIFERATK SRKIL

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.